| add.segments | Function to add horizontal line segments to an existing plot | 
| ar1.coefficient.prior | Normal prior for an AR1 coefficient | 
| beta.prior | Beta prior for a binomial proportion | 
| Boom-package | Boom | 
| boxplot.mcmc.matrix | Plot the distribution of a matrix | 
| boxplot.true | Compare Boxplots to True Values | 
| check | Check MCMC Output | 
| check.data | Checking data formats | 
| circles | Draw Circles | 
| compare.den | Compare several density estimates. | 
| compare.dynamic.distributions | Compare Dynamic Distributions | 
| compare.many.densities | Compare several density estimates. | 
| compare.many.ts | Compares several density estimates. | 
| compare.vector.distributions | Boxplots to compare distributions of vectors | 
| diff.double.model | DiffDoubleModel | 
| dirichlet-distribution | The Dirichlet Distribution | 
| dirichlet.prior | Dirichlet prior for a multinomial distribution | 
| discrete-uniform-prior | Discrete prior distributions | 
| dmvn | Multivariate Normal Density | 
| double.model | Prior distributions for a real valued scalar | 
| external.legend | Add an external legend to an array of plots. | 
| gamma.prior | Gamma prior distribution | 
| generate_factor_data | Generate a data frame of all factor data | 
| histabunch | A Bunch of Histograms | 
| inverse-wishart | Inverse Wishart Distribution | 
| invgamma | Inverse Gamma Distribution | 
| is.even | Check whether a number is even or odd. | 
| lmgamma | Log Multivariate Gamma Function | 
| log.integrated.gaussian.likelihood | Log Integrated Gaussian Likelihood | 
| lognormal.prior | Lognormal Prior Distribution | 
| markov.prior | Prior for a Markov chain | 
| match_data_frame | MatchDataFrame | 
| mscan | Scan a Matrix | 
| mvn.diagonal.prior | diagonal MVN prior | 
| MvnGivenSigmaMatrixPrior | Conditional Multivaraite Normal Prior Given Variance | 
| mvn.independent.sigma.prior | Independence prior for the MVN | 
| mvn.prior | Multivariate normal prior | 
| normal.inverse.gamma.prior | Normal inverse gamma prior | 
| normal.inverse.wishart.prior | Normal inverse Wishart prior | 
| normal.prior | Normal (scalar Gaussian) prior distribution | 
| pairs.density | Pairs plot for posterior distributions. | 
| plot.density.contours | Contour plot of a bivariate density. | 
| plot.dynamic.distribution | Plots the pointwise evolution of a distribution over an index... | 
| plot.macf | Plots individual autocorrelation functions for many-valued... | 
| plot.many.ts | Multiple time series plots | 
| regression.coefficient.conjugate.prior | Regression Coefficient Conjugate Prior | 
| replist | Repeated Lists of Objects | 
| rmvn | Multivariate Normal Simulation | 
| rvectorfunction | RVectorFunction | 
| scaled.matrix.normal.prior | Scaled Matrix-Normal Prior | 
| sd.prior | Prior for a standard deviation or variance | 
| sufstat | Sufficient Statistics | 
| suggest.burn.log.likelihood | Suggest MCMC Burn-in from Log Likelihood | 
| thin | Thin the rows of a matrix | 
| thin.matrix | Thin a Matrix | 
| timeseries.boxplot | Time Series Boxplots | 
| ToString | Convert to Character String | 
| traceproduct | Trace of the Product of Two Matrices | 
| uniform.prior | Uniform prior distribution | 
| wishart | Wishart Distribution | 
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