API for Brundle
Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data

Global functions
Brundle Man page Source code
dbaControl Man page
dbaExperiment Man page
jg.applyNormalisation Man page Source code
jg.conditions Man page
jg.controlCountsTreated Man page
jg.controlCountsUntreated Man page
jg.controlPeaks Man page
jg.controlPeakset Man page
jg.controlPeaksetDeSeq Man page
jg.controlResultsDeseq Man page
jg.convertPeakset Man page Source code
jg.correctDBASizeFactors Man page Source code
jg.countAlignedMReads Man page Source code
jg.dbaGetPeakset Man page Source code
jg.experimentPeakset Man page
jg.experimentResultsDeseq Man page
jg.getControlCounts Man page Source code
jg.getCorrectionFactor Man page Source code
jg.getDba Man page Source code
jg.getNormalizationCoefficient Man page Source code
jg.getSampleIds Man page Source code
jg.plotDeSeq Man page Source code
jg.plotDeSeqCombined Man page Source code
jg.plotMA Man page Source code
jg.plotNormalization Man page Source code
jg.runDeSeq Man page Source code
Brundle documentation built on Feb. 16, 2018, 1:02 a.m.