Files in CHAT
Clonal Heterogeneity Analysis Tool
NAMESPACE
data
data/A0SD.LRR.rda
data/A0SD.BAF.rda
data/prior.rda
data/datalist
data/mcmc.rda
R
R/getOrigin.R
R/getUnifiedMap.R
R/MergeBreakPointsByChr.R
R/getDistToPath.R
R/getSampleAGP.R
R/findRobustPeaks.R
R/plotBAFLRR.R
R/getBAFmean.R
R/getCanonicalLines.R
R/getDPfit.R
R/getPloidy.R
R/Dist.R
R/getPermutation.R
R/getHets.R
R/getDiploidOrigin.R
R/getCoord.R
R/getSeg.R
R/getAmpDel.R
R/getSegChr.R
R/getLOH.R
R/getGrid.R
R/getSampleCCF.R
R/getAGP.R
R/is.nearCP.R
R/getSumDist.R
R/ApproxBIC.R
R/getKmeans.R
R/getSegPurity.R
R/getCosine.R
R/getsAGP.R
R/getCCF.R
R/SampleNMM.R
R/plotIdentifiableZone.R
R/DPfitSamples.R
R/getPeaks.R
R/getPara.sAGP.R
R/getSegChr.CBS.R
R/getPara.R
R/NormalizeLRR.R
MD5
DESCRIPTION
man
man/findRobustPeaks.Rd
man/getOrigin.Rd
man/getsAGP.Rd
man/DPfitSamples.Rd
man/getSegChr.Rd
man/getCanonicalLines.Rd
man/getPara.sAGP.Rd
man/getDPfit.Rd
man/getPermutation.Rd
man/getHets.Rd
man/getDiploidOrigin.Rd
man/A0SD.BAF.Rd
man/getSumDist.Rd
man/SampleNMM.Rd
man/getAmpDel.Rd
man/ApproxBIC.Rd
man/getSeg.Rd
man/plotIdentifiableZone.Rd
man/getLOH.Rd
man/getSampleCCF.Rd
man/plotBAFLRR.Rd
man/getCosine.Rd
man/getCCF.Rd
man/getDistToPath.Rd
man/getPara.Rd
man/getSegPurity.Rd
man/getCoord.Rd
man/getKmeans.Rd
man/getSegChr.CBS.Rd
man/getPeaks.Rd
man/Dist.Rd
man/getSampleAGP.Rd
man/A0SD.LRR.Rd
man/CHAT-package.Rd
man/prior.Rd
man/MergeBreakPointsByChr.Rd
man/getUnifiedMap.Rd
man/getPloidy.Rd
man/getGrid.Rd
man/getAGP.Rd
man/NormalizeLRR.Rd
man/is.nearCP.Rd
man/getBAFmean.Rd
man/mcmc.Rd
