Description Usage Arguments Value Author(s) Examples
View source: R/MergeBreakPointsByChr.R
Two sets of break points from one chromosome, typically from B-allele frequency and logR ratios respectively are inputs, and this function merges the two sets as one.
1 | MergeBreakPointsByChr(chr, id, seg.B, seg.L, map.chr, thr = 5)
|
chr |
chromosome number |
id |
sample identifier |
seg.B |
segmentation matrix for BAF as returned by |
seg.L |
segmentation matrix for LRR as returned by |
map.chr |
SNP positions or starting position of aCGH markers. |
thr |
if two break points are located within |
a new matrix with merged segmentations.
Bo Li
1 2 3 4 |
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