getBAFmean: Compute mean of BAF

Description Usage Arguments Value Author(s) Examples

View source: R/getBAFmean.R

Description

Using bi-modal Guassian fitting to calculate folded B-allele-frequency.

Usage

1

Arguments

bb

numeric vector, original B-allele-frequency data from a given DNA segment.

Value

a numeric number for folded BAF estimate.

Author(s)

Bo Li

Examples

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## generate BAF values symmetric around 0.5, resembling real data in a CNA region
y1<-rnorm(100,0.3,0.1)
y2<-rnorm(100,0.7,0.1)
y<-c(y1,y2)
## compute folded BAF
getBAFmean(y)

## generate BAF values distributed around 0.5, resembling real data in a non-CNA region
y<-rnorm(200,0.5,0.2)
## compute folded BAF
getBAFmean(y)

CHAT documentation built on May 29, 2017, 10:32 p.m.