applyBliss: Function calculates Bliss Synergy, associated BIs and global...

In COMBIA: Synergy/Antagonism Analyses of Drug Combinations

Description

Function calculates Bliss Synergy, associated BIs and global BIs

Usage

applyBliss(noOfRows, noOfCols, rawDataPreProcessed, nBoot)

Arguments

noOfRows	Number of rows in the experiment
noOfCols	Number of columns in the experiment
rawDataPreProcessed	Data matrix
nBoot	Number of bootstrap

Value

Three lists, first list consists of Bliss Synergy/Antagonism, lower bound of BI and upper bound of BI. 2nd list consists of global BI of Maximun synergistic combiantion and 3rd list consists of global BI of maximum antagonistic combination.

Author(s)

Muhammad kashif

Examples

dataFile <- system.file( "extdata", "rawDataPreProcessed.csv", package="COMBIA" )
dataSample <- read.csv(dataFile, header=FALSE )
nR <- 8
nC <- 10
rslt <- applyBliss(nR, nC,  as.matrix(dataSample ), 500) 

Example output

Loading required package: hash
hash-3.0.1 provided by Decision Patterns

Loading required package: lattice
Loading required package: latticeExtra
Loading required package: RColorBrewer
Loading required package: oro.nifti
oro.nifti 0.9.1

COMBIA documentation built on May 2, 2019, 7:23 a.m.