readOtherValues: Read data from raw format and clean for outliers
In COMBIA: Synergy/Antagonism Analyses of Drug Combinations

Description Usage Arguments Value Author(s) Examples

Read data from raw format and clean for outliers

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readOtherValues(file, sheet, rskip = 0, cStart = 1, wellRangesExcel,
  platetype, minThersholdForCVCal, minThersholdForCV, survivalFunc,
  xConcentration, yConcentration)

`file`	Name of fiele to be read
`sheet`	Sheet
`rskip`	Number of rows to skip before reading data, default rskip=0
`cStart`	Number of column to start reading data, default cStart=1
`wellRangesExcel`	well ranges in excel formate
`platetype`	384 or 96
`minThersholdForCVCal`	Thresolld for data outliears in CV
`minThersholdForCV`	Thresold of values in CV not to remove
`survivalFunc`	A function to calculate survival values
`xConcentration`	Concentrations of drug at x-axis
`yConcentration`	Concentrations of drugs at y-axis

Matrix of survival values of experimental replicates

Muhammad kashif

fl <- system.file("extdata", "FluoOptima_384_2014-03-28test.csv", package="COMBIA")
wls <- list(  c(  "K1:K8", "L1:L8","A1:J8",     "K9:K16", "L9:L16","A9:J16", 
                  "W1:W8", "X1:X8","M1:V8",     "W9:W16", "X9:X16","M9:V16")
                  )
sh <- 1
rskip <- 0 
cStart <- 1
pltype <- "384"
minThersholdForCVCal <- 0.1
minThersholdForCV<- 0.3
survivalFunc <- function (x,y,z) {(x-z)/(y-z)}
xConc <- c(0.00,  0.20,  0.39,  0.78,  1.56,  3.12,  6.25, 12.50, 25.00, 50.00) 
yConc <- c(128,  64,  32,  16,   8,   4,   2,   0)
rslt <- readOtherValues(fl, sh, rskip, cStart, wls, pltype, minThersholdForCVCal, 
                minThersholdForCV, survivalFunc, xConc, yConc )