Files in DIscBIO
A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
MD5
NEWS.md
NAMESPACE
DESCRIPTION
LICENSE
R/DIscBIO-generic-DEGanalysis2clust.R
R/customConverters.R
R/DIscBIO-generic-comptSNE.R
R/PPI.R
R/NetAnalysis.R
R/DIscBIO-generic-plotLabelstSNE.R
R/RpartDT.R
R/datasets.R
R/J48DTeval.R
R/DIscBIO-generic-FindOutliers.R
R/DIscBIO-generic-NoiseFiltering.R
R/DIscBIO-generic-Exprmclust.R
R/internal-functions-samr-adapted.R
R/RpartEVAL.R
R/DIscBIO-generic-plotSymbolstSNE.R
R/DIscBIO-generic-plotExptSNE.R
R/DIscBIO-generic-pseudoTimeOrdering.R
R/DIscBIO-generic-Clustexp.R
R/internal-functions.R
R/DIscBIO-generic-Normalizedata.R
R/DIscBIO-generic-plotOrderTsne.R
R/VolcanoPlot.R
R/DIscBIO-classes.R
R/PlotMBpca.R
R/DIscBIO-generic-PCAplotSymbols.R
R/Networking.R
R/Jaccard.R
R/bootstrap.R
R/DIscBIO-generic-plottSNE.R
R/cross.val.R
R/DIscBIO-generic-ClassVectoringDT.R
R/DIscBIO-generic-FinalPreprocessing.R
R/DIscBIO-generic-plotSilhouette.R
R/DIscBIO-generic-ClustDiffGenes.R
R/DIscBIO-generic-clusteringOrder.R
R/DIscBIO-generic-PlotmclustMB.R
R/DIscBIO-generic-plotGap.R
R/J48DT.R
R/calc_pcareduceres.R
R/DIscBIO-generic-clustheatmap.R
R/DIscBIO-generic-DEGanalysis.R
data/valuesG1msTest.rda
data/HumanMouseGeneIds.rda
man/prepExampleDataset.Rd
man/replaceDecimals.Rd
man/resa.Rd
man/reformatSiggenes.Rd
man/DISCBIO.Rd
man/J48DTeval.Rd
man/plotGap.Rd
man/clustheatmap.Rd
man/KmeanOrder.Rd
man/PlotmclustMB.Rd
man/VolcanoPlot.Rd
man/PCAplotSymbols.Rd
man/plotSilhouette.Rd
man/RpartDT.Rd
man/RpartEVAL.Rd
man/retrieveURL.Rd
man/sammy.Rd
man/foldchange.seq.twoclass.unpaired.Rd
man/plottSNE.Rd
man/valuesG1msTest.Rd
man/J48DT.Rd
man/FinalPreprocessing.Rd
man/Networking.Rd
man/pseudoTimeOrdering.Rd
man/DISCBIO2SingleCellExperiment.Rd
man/NetAnalysis.Rd
man/Jaccard.Rd
man/NoiseFiltering.Rd
man/plotSymbolstSNE.Rd
man/FindOutliers.Rd
man/DEGanalysis2clust.Rd
man/HumanMouseGeneIds.Rd
man/plotExptSNE.Rd
man/check.format.Rd
man/Normalizedata.Rd
man/wilcoxon.unpaired.seq.func.Rd
man/ClustDiffGenes.Rd
man/PlotMBpca.Rd
man/Clustexp.Rd
man/rankcols.Rd
man/DEGanalysis.Rd
man/samr.estimate.depth.Rd
man/ClassVectoringDT.Rd
man/customConvertFeats.Rd
man/PPI.Rd
man/Exprmclust.Rd
man/plotOrderTsne.Rd
man/plotLabelstSNE.Rd
man/as.DISCBIO.Rd
man/comptSNE.Rd
