API for GeoTcgaData
Processing various types of data on GEO and TCGA

Global functions
.onAttach Source code
Diff_limma Man page Source code
GSE66705_sample2 Man page
GeoTcgaDataStartupMessage Source code
Merge_methy_tcga Man page Source code
arrayDiff Man page Source code
cal_mean_module Man page Source code
classify_sample Man page Source code
countToEffCounts Source code
countToFpkm Source code
countToFpkm_matrix Man page Source code
countToTpm Source code
countToTpm_matrix Man page Source code
diff_CNV Man page Source code
diff_CNV_segment Source code
diff_RNA Man page Source code
diff_RNA_ucsc Man page Source code
diff_SNP Man page Source code
diff_SNP_tcga Man page Source code
diff_gene Man page Source code
differential_cnv Man page Source code
fpkmToCount Source code
fpkmToTpm Source code
fpkmToTpm_matrix Man page Source code
geneExpress Man page
gene_ave Man page Source code
gene_cov Man page
get_methy_df Source code
id_ava Man page Source code
id_conversion Man page Source code
id_conversion_vector Man page Source code
kegg_liver Man page
methyDiff Man page Source code
methyDiff_ucsc Man page Source code
module Man page
prepare_chi Man page Source code
profile Man page
quiet Source code
rep1 Man page Source code
rep2 Man page Source code
tcga_cli_deal Man page Source code
ventricle Man page
GeoTcgaData documentation built on Sept. 23, 2022, 9:05 a.m.