plot_position_frequency: Position frequency

In HaDeX2: Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data

Position frequency

Description

Plot the frequency of coverage for protein sequence

Usage

plot_position_frequency(
  dat,
  protein = dat[["Protein"]][1],
  state = dat[["State"]][1]
)

Arguments

dat	data as imported by the read_hdx function
protein	selected protein
state	selected biological state for given protein

Details

The function plot_position_frequency generates a histogram of the coverage frequency in selected biological states for selected protein. The position frequency plot presents how many times each position of the sequence is covered by different peptides.

Value

a ggplot object.

See Also

read_hdx plot_coverage

Examples

plot_position_frequency(alpha_dat)

HaDeX2 documentation built on Feb. 9, 2026, 5:07 p.m.