show_aggregated_uptake_data: Show aggregated values in friendly form

In HaDeX2: Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data

Show aggregated values in friendly form

Description

Function plots the aggregated uptake data with regard to submitted parameters in a friendly form. Designed for GUI.

Usage

show_aggregated_uptake_data(
  aggregated_dat,
  differential = FALSE,
  fractional = TRUE,
  theoretical = FALSE
)

Arguments

aggregated_dat	aggregated uptake data
differential	indicator if the aggregated_dat is single-state or differential
fractional	logical, determines if values are fractional
theoretical	logical, determines if values are theoretical

Value

a data.frame object

Examples

# disabled due to long execution time 

kin_dat <- create_uptake_dataset(alpha_dat, states = "Alpha_KSCN")
aggregated_dat <- create_aggregated_uptake_dataset(kin_dat)
show_aggregated_uptake_data(aggregated_dat)

diff_uptake_dat <- create_diff_uptake_dataset(alpha_dat)
aggregated_diff_dat <- create_aggregated_diff_uptake_dataset(diff_uptake_dat)
show_aggregated_uptake_data(aggregated_diff_dat, differential = TRUE)

HaDeX2 documentation built on Feb. 9, 2026, 5:07 p.m.