Infusion: Inference Using Simulation

Implements functions for simulation-based inference. In particular, implements functions to perform likelihood inference from data summaries whose distributions are simulated.

Author
Fran├žois Rousset [aut, cre, cph]
Date of publication
2016-07-26 02:19:40
Maintainer
Fran├žois Rousset <francois.rousset@umontpellier.fr>
License
CeCILL-2
Version
1.0.0
URLs

View on CRAN

Man pages

add.simulation
Create or augment a list of simulated distributions of...
confint.SLik
Compute confidence intervals by (profile) summary likelihood
densv
Saved computations of inferred log-likelihoods
handling_NAs
Discrete probability masses and NA/NaN/Inf in distributions...
infer_jointDens
Infer as (summary) likelihood surface from simulation table
infer_logLs
Infer log Likelihoods using simulated distributions of...
infer_surface
Infer a (summary) likelihood or tail probability surface from...
Infusion
Inference using simulation
Infusion-internal
Internal Infusion Functions
init_grid
Define starting points in parameter space.
magic.binning
Multivariate histogram
MSL
Maximum likelihood from an inferred likelihood surface
options
Infusion options settings
plot1Dprof
Plot likelihood profiles
plot.SLik
Plot SLik or SLikp objects
profile.SLik
Compute profile summary likelihood
project
Learn a projection method for statistics and applies it
refine.SLik
Refine estimates iteratively.
sample_volume
Sample the parameter space

Files in this package

Infusion
Infusion/inst
Infusion/inst/CITATION
Infusion/tests
Infusion/tests/testthat
Infusion/tests/testthat/test-Infusion.R
Infusion/tests/test-all.R
Infusion/NAMESPACE
Infusion/data
Infusion/data/densb.RData
Infusion/data/myrnorm.RData
Infusion/data/densv.RData
Infusion/R
Infusion/R/infer_surface.R
Infusion/R/project.R
Infusion/R/jointDens.R
Infusion/R/plotProfiles.R
Infusion/R/profile.R
Infusion/R/plot.SLik.R
Infusion/R/confintLR.SLik.R
Infusion/R/check_logLs_input.R
Infusion/R/SLik.R
Infusion/R/add_simulation.R
Infusion/R/Rmixmod.R
Infusion/R/undocumentedFns.R
Infusion/R/newParameters.R
Infusion/R/infer_logLs.R
Infusion/R/MSL.R
Infusion/R/SLikSQuant.R
Infusion/R/quantiles.R
Infusion/MD5
Infusion/DESCRIPTION
Infusion/man
Infusion/man/profile.SLik.Rd
Infusion/man/handling_NAs.Rd
Infusion/man/init_grid.Rd
Infusion/man/refine.SLik.Rd
Infusion/man/add.simulation.Rd
Infusion/man/Infusion.Rd
Infusion/man/densv.Rd
Infusion/man/confint.SLik.Rd
Infusion/man/options.Rd
Infusion/man/MSL.Rd
Infusion/man/project.Rd
Infusion/man/infer_jointDens.Rd
Infusion/man/plot.SLik.Rd
Infusion/man/infer_logLs.Rd
Infusion/man/infer_surface.Rd
Infusion/man/sample_volume.Rd
Infusion/man/magic.binning.Rd
Infusion/man/plot1Dprof.Rd
Infusion/man/Infusion-internal.Rd