Files in MAFDash
Create an HTML Dashboard to Visualize Data from MAF File

MD5

NAMESPACE

DESCRIPTION

R/generateMutationTypePlot.R R/generateTiTvPlot.R R/getMAFDataTCGA.R R/getMAFDashboard.R R/generateTCGAComparePlot.R R/generateOncoPlot.R R/filterMAF.R R/helperFunctions.R R/generateSingleRibbonPlot.R R/generateOverlapPlot.R R/generateBurdenPlot.R

inst/doc/MAFDash.html

inst/doc/MAFDash.Rmd inst/doc/MAFDash.R inst/extdata/variant_table.Rmd

inst/extdata/test.mutect2.maf.gz

inst/extdata/MAFDash.Rmd inst/extdata/summary_plot.Rmd

inst/extdata/test.bed

inst/extdata/heatmap.Rmd inst/extdata/summary_table.Rmd

inst/extdata/test.clinical.txt

inst/extdata/custom_image.Rmd inst/extdata/burden.Rmd inst/extdata/oncoplot.Rmd inst/extdata/cooccurence.Rmd

build/vignette.rds

vignettes/MAFDash.Rmd man/filter_maf_chunked.Rd man/generateMutationTypePlot.Rd man/generateRibbonPlot.Rd man/compute_exome_coverage.Rd man/getTCGAClinicalAnnotation.Rd man/getTCGAClinicalColors.Rd man/getMAFdataTCGA.Rd man/generateOverlapPlot.Rd man/generateOncoPlot.Rd man/getMAFDashboard.Rd man/detectMAFGenome.Rd man/filterMAF.Rd man/generateVariantTable.Rd man/createOncoMatrix.Rd man/generateTiTvPlot.Rd man/generateBurdenPlot.Rd man/generateTCGAComparePlot.Rd

MAFDash documentation built on April 1, 2022, 9:05 a.m.

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