filterCoAccessibleLinks: 'filterCoAccessibleLinks'

In MOCHA: Modeling for Single-Cell Open Chromatin Analysis

filterCoAccessibleLinks

Description

filterCoAccessibleLinks will filter the output from getCoAccessibleLinks by a threshold, retaining links with a absolute correlation greater than the threshold. This function also adds the chr, start, and end site of each link to the output table.

Usage

filterCoAccessibleLinks(TileCorr, threshold = 0.5)

Arguments

TileCorr	The correlation table output from getCoAccessibleLinks
threshold	Keep

Value

FilteredTileCorr The filtered correlation table with chr, start, and end site of each link

Examples

## Not run: 
# links is the output of MOCHA::getCoAccessibleLinks
MOCHA::filterCoAccessibleLinks(links, threshold = 0.5)

## End(Not run)

MOCHA documentation built on May 29, 2024, 2:25 a.m.