dataPapioniniVanderpool: Papionini gene tree dataset

In MSCquartets: Analyzing Gene Tree Quartets under the Multi-Species Coalescent

Papionini gene tree dataset

Description

A text file dataset for Papionini containing 1730 gene trees on 7 taxa. This is a subset of the data of \insertCiteVanderpool2020;textualMSCquartets.

Format

A text file with 1703 metric Newick gene trees each with 7 leaves labelled:
Cercocebus_atys, Mandrillus_leucophaeus, Papio_anubis, Theropithecus_gelada, Macaca_fascicularis, Macaca_mulatta, Macaca_nemestrina

Details

File is accessed as system.file("extdata","dataPapioniniVanderpool",package="MSCquartets"), for example via the ape command:

gts = read.tree(file=system.file("extdata","dataPapioniniVanderpool",package="MSCquartets"))

Source

\Sexpr[results=rd]{tools:::Rd_expr_doi("10.5061/dryad.rfj6q577d")}

References

\insertRef

Vanderpool2020MSCquartets

MSCquartets documentation built on Oct. 31, 2024, 1:08 a.m.