Files in MSCquartets
Analyzing Gene Tree Quartets under the Multi-Species Coalescent

MD5
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R
R/sysdata.rda
R/ExpectedCFs.R R/TreeOfBlobs.R R/pHist.R R/MSCquartets-package.R R/StarQuartetHypTest.R R/TreeQuartetHypTest.R R/NANUQ.R R/QuartetTally.R R/TreeQuartetDist.R R/ParallelTableCpp.R R/SimplexPlot.R R/WQDCrecursive.R
src/RcppExports.cpp
src/QuartetTallyCpp.cpp
src/TINNIKcpp.cpp
inst/REFERENCES.bib
inst/doc/TINNIK.html
inst/doc/TINNIK.R inst/doc/TINNIK.Rmd
inst/extdata/dataHeliconiusMartin
inst/extdata/dataGeneTreeSample
inst/extdata/dataYeastRokas
inst/extdata/dataPapioniniVanderpool
build/vignette.rds
build/partial.rdb
vignettes/vigREFS.bib
vignettes/TINNIK.Rmd
data/pTableYeastRokas.rda
man/T3density.Rd man/BQinference.Rd man/simplexPoint.Rd man/quartetStarTestInd.Rd man/taxonNames.Rd man/MSCquartets-package.Rd man/simplexLabels.Rd man/NANUQ.Rd man/NANUQdist.Rd man/WQDSAdjustLengths.Rd man/quartetNetworkDist.Rd man/expectedCFs.Rd man/WQDS.Rd man/quartetTreeErrorProb.Rd man/quartetDist.Rd man/quartetTableDominant.Rd man/quartetBTinferencePlot.Rd man/quartetTableResolved.Rd man/dataHeliconiusMartin.Rd man/TINNIK.Rd man/HolmBonferroni.Rd man/WQDCrecursive.Rd man/dataPapioniniVanderpool.Rd man/nodeGroups.Rd man/pTableYeastRokas.Rd man/simplexCoords.Rd man/treeFromSplits.Rd man/dataYeastRokas.Rd man/simplexSegment.Rd man/quartetTablePrint.Rd man/pvalHist.Rd man/cutDensity.Rd man/quartetTestPlot.Rd man/collapseEdges.Rd man/M0.Rd man/quartetTableCollapse.Rd man/topDist.Rd man/dataGeneTreeSample.Rd man/quartetTreeTestInd.Rd man/quartetCutTestInd.Rd man/quartetCutMLE.Rd man/simplexPrepare.Rd man/QDS.Rd man/simplexText.Rd man/powerDivStat.Rd man/treeOfBlobs.Rd man/quartetStarTest.Rd man/TINNIKdist.Rd man/nexusDist.Rd man/estimateEdgeLengths.Rd man/quartetTallyCpp.Rd man/quartetTableParallel.Rd man/T1density.Rd man/quartetWeightedDist.Rd man/sortQuartetTableRows.Rd man/WQDC.Rd man/quartetCutTest.Rd man/initBquartets.Rd man/quartetTable.Rd man/QDC.Rd man/compatibleSplits.Rd man/quartetTreeTest.Rd
MSCquartets documentation built on Sept. 12, 2024, 7:38 a.m.