quartetStarTest: Hypothesis test for quartet counts fitting a star tree under...
In MSCquartets: Analyzing Gene Tree Quartets under the Multi-Species Coalescent
View source: R/StarQuartetHypTest.R
quartetStarTest R Documentation
Hypothesis test for quartet counts fitting a star tree under the MSC
Description
Perform hypothesis test for star tree for a vector of quartet counts to fit expected frequencies of (1/3,1/3,1/3).
The test performed is a standard Chi-square with 2 degrees of freedom.
Usage
quartetStarTest(obs)
Arguments
obs
vector of 3 counts of resolved quartet frequencies
Value
p-value
Examples
obs=c(16,72,12)
quartetStarTest(obs)
MSCquartets documentation built on Oct. 31, 2024, 1:08 a.m.
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View source: R/StarQuartetHypTest.R
| quartetStarTest | R Documentation |
Hypothesis test for quartet counts fitting a star tree under the MSC
Description
Perform hypothesis test for star tree for a vector of quartet counts to fit expected frequencies of (1/3,1/3,1/3). The test performed is a standard Chi-square with 2 degrees of freedom.
Usage
quartetStarTest(obs)
Arguments
obs |
vector of 3 counts of resolved quartet frequencies |
Value
p-value
Examples
obs=c(16,72,12)
quartetStarTest(obs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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