dataYeastRokas: Yeast gene tree dataset
In MSCquartets: Analyzing Gene Tree Quartets under the Multi-Species Coalescent
dataYeastRokas R Documentation
Yeast gene tree dataset
Description
A text file dataset for Yeast containing 106 gene trees on 8 taxa (7 Saccharomyces and 1 Candida outgroup). This is a subset of the data
of \insertCiteRokas03;textualMSCquartets.
Format
A text file with 106 topological Newick gene trees on the taxa:
Sbay, Scas, Scer, Sklu, Skud, Smik, Spar, and Calb (outgroup).
Details
File is accessed as system.file("extdata","dataYeastRokas",package="MSCquartets"), for example
via the ape command:
gts=read.tree(file = system.file("extdata","dataYeastRokas",package="MSCquartets"))
Source
References
\insertRefRokas03MSCquartets
MSCquartets documentation built on Nov. 2, 2023, 5:32 p.m.
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| dataYeastRokas | R Documentation |
Yeast gene tree dataset
Description
A text file dataset for Yeast containing 106 gene trees on 8 taxa (7 Saccharomyces and 1 Candida outgroup). This is a subset of the data of \insertCiteRokas03;textualMSCquartets.
Format
A text file with 106 topological Newick gene trees on the taxa: Sbay, Scas, Scer, Sklu, Skud, Smik, Spar, and Calb (outgroup).
Details
File is accessed as system.file("extdata","dataYeastRokas",package="MSCquartets"), for example
via the ape command:
gts=read.tree(file = system.file("extdata","dataYeastRokas",package="MSCquartets"))
Source
References
\insertRefRokas03MSCquartets
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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