NGStesttype: Cancer Types for the TCGA Test Set Samples

In MSIseq: Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations

Description

This is a data frame containing the cancer types for each sample in test.mutationNum.

Usage

data(NGStesttype)

Format

A data frame with 426 observations on the following 2 variables:

Tumor_Sample_Barcode

the sample ID as a character vector

cancer_type

a factor indicating cancer types for each sample

Details

This is the sample data for MSIseq.classify function input.

Source

https://tcga-data.nci.nih.gov/tcga/

MSIseq documentation built on May 2, 2019, 7:23 a.m.