find.mono.repeats: Find Mono-nucleotide Repeats

Description Usage Arguments Details Value Author(s) See Also

View source: R/find.mono.R

Description

This function reads in a file with multiple fasta records and find the mononucleotide repeats in the text.

Usage

1
find.mono.repeats(text, min.len = 5)

Arguments

text

The return object from function read.fasta.

min.len

The minimum length of the mononucleotide repeats searched by the function.

Details

This function find the mononucleotide repeats in the text and return a data frame with the following columns.

Value

A data frame with 3 columns that are the 3 variables listed above.

Author(s)

Mini Huang

See Also

read.fasta


MSIseq documentation built on May 29, 2017, 9:07 p.m.