cleanUpPheno: Automatic preprocessing of $pheno dataframe
In MetaIntegrator: Meta-Analysis of Gene Expression Data
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Takes a Dataset object and:
Usage
1
cleanUpPheno(myDataset)
Arguments
myDataset
a datasetObject that contains unprocessed $pheno
Value
myDataset a datasetObject that contains processed $pheno and original unprocessed $rawPheno
Author(s)
Erika Bongen
Examples
1
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## Not run:
# Download and automatically preprocess pheno
gse53195 = getGEOData("GSE53195")
gse53195 = gse53195$originalData$GSE53195
View(gse53195$pheno) # Original $pheno
gse53195 = cleanUpPheno(gse53195)
View(gse53195$rawPheno) # Original $pheno
View(gse53195$pheno) # Preprocessed $Pheno
## End(Not run)
MetaIntegrator documentation built on March 26, 2020, 6:29 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Takes a Dataset object and:
Usage
1 | cleanUpPheno(myDataset)
|
Arguments
myDataset |
a |
Value
myDataset a datasetObject that contains processed $pheno and original unprocessed $rawPheno
Author(s)
Erika Bongen
Examples
1 2 3 4 5 6 7 8 9 10 | ## Not run:
# Download and automatically preprocess pheno
gse53195 = getGEOData("GSE53195")
gse53195 = gse53195$originalData$GSE53195
View(gse53195$pheno) # Original $pheno
gse53195 = cleanUpPheno(gse53195)
View(gse53195$rawPheno) # Original $pheno
View(gse53195$pheno) # Preprocessed $Pheno
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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