immunoStatesMeta: immunoStates deconvolution analysis on MetaIntegrator...

In MetaIntegrator: Meta-Analysis of Gene Expression Data

Description

Run immunoStates and load the results into $originalData for running meta-analysis on the cell proportion estimates.

Usage

immunoStatesMeta(metaObject)

Arguments

metaObject

a MetaIntegrator formatted Meta object.

Value

Results from immunoStates stored in $originalData

Author(s)

Francesco Vallania

Examples

## Not run: 
# Example won't work on tinyMetaObject because it requires real gene names
# Download the needed datasets for processing. 
sleData <- getGEOData(c("GSE11909","GSE50635", "GSE39088"))

# Run immunoStates
immunoStatesEstimates <- immunoStateMeta(sleData)

## End(Not run)

MetaIntegrator documentation built on March 26, 2020, 6:29 p.m.