summaryROCCalc: Calculate the summaryROC statistics
In MetaIntegrator: Meta-Analysis of Gene Expression Data
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/summaryROCPlot.R
Description
Calculate the summaryROC statistics
Usage
1
summaryROCCalc(metaObject, filterObject, bootstrapReps = 500)
Arguments
metaObject
a Meta object which must have the $originalData populated
filterObject
a MetaFilter object containing the signature genes that will be used for calculating the score
bootstrapReps
number of bootstrap simulations to run for confidence interval on summary ROC
Value
Summary AUC statistics
Author(s)
Timothy E. Sweeney
Examples
1
2
3
4
5
## Not run:
summaryROCCalc(tinyMetaObject, filterObject =
tinyMetaObject$filterResults$pValueFDR0.05_es0_nStudies1_looaTRUE_hetero0)
## End(Not run)
MetaIntegrator documentation built on March 26, 2020, 6:29 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/summaryROCPlot.R
Description
Calculate the summaryROC statistics
Usage
1 | summaryROCCalc(metaObject, filterObject, bootstrapReps = 500)
|
Arguments
metaObject |
a Meta object which must have the $originalData populated |
filterObject |
a MetaFilter object containing the signature genes that will be used for calculating the score |
bootstrapReps |
number of bootstrap simulations to run for confidence interval on summary ROC |
Value
Summary AUC statistics
Author(s)
Timothy E. Sweeney
Examples
1 2 3 4 5 | ## Not run:
summaryROCCalc(tinyMetaObject, filterObject =
tinyMetaObject$filterResults$pValueFDR0.05_es0_nStudies1_looaTRUE_hetero0)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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