Man pages for QTLRel
Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
| aicVC | AIC Model Selection |
| blup | Best Linear Unbiased Prediction |
| cic | Calculate Jacquard condensed identity coefficients |
| eigen_sym | Spectral decomposition of a matrix |
| estVC | Estimate Variance Component Parameters |
| genMatrix | Derive genetic matrices |
| genoImpute | Impute Genotypic Data |
| genoProb | Probability of a Genotype. |
| genoSim | Generate Genotypic Data |
| gls | Generalized Least Squares Estimates |
| hapSim | Generate Genotypic Data |
| ibs | Estimate Jacquard condensed identity coefficients |
| kinship | Calculate kinship coefficients |
| lodci | Estimate LOD Support Intervals |
| mAIC | Multiple QTL AIC |
| miscEx | Genotype data, phenotype data, genetic map and pedigree. |
| misFct | A collection of other functions. |
| nullSim | Simulate null distribution |
| pedRecode | Recode a Pedigree |
| plots | Plotting |
| qqplot | Quantile-Quantile Plots |
| qtl2rel | Convert data from R/qtl to QTLRel format |
| qtlVar | QTL Variance |
| rel2qtl | Convert data from QTLRel to R/qtl format |
| rem | Random effect matrices |
| scanOne | Genome Scan for QTL |
| scanTwo | Genome Scan for Epistasis |
