rel2qtl: Convert data from QTLRel to R/qtl format

View source: R/rel2qtl.R

rel2qtlR Documentation

Convert data from QTLRel to R/qtl format

Description

Convert the data for a QTL mapping experiment from the QTLRel format to that used by R/qtl (http://www.rqtl.org).

Usage

rel2qtl(gdat, pdat, gmap)

Arguments

gdat

Genotype data

pdat

Phenotype data

gmap

Genetic map

Details

Pedigree information is ignored, and X chromosome data is omitted.

The data are treated as an intercross.

Value

A cross object for the R/qtl package (http://www.rqtl.org).

Author(s)

Karl W Broman, kbroman@biostat.wisc.edu

See Also

qtl2rel

Examples

data(miscEx)
f8 <- rel2qtl(gdatF8, pdatF8, gmapF8)
summary(f8)

QTLRel documentation built on Aug. 9, 2023, 1:07 a.m.

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