Description Usage Arguments Value References Examples
This method allows to download/import the full compendium for the selected organism
1 | getCompendium(organism = "hpylo", path = NULL)
|
organism |
A character containing the organism id: use |
path |
A string indicating the path where the file will be either downloaded or read, if already retrieved |
A list containing two or three data.frames.
In case switchVersion
is equal to 2:
exprdata |
the full compendium for the selected organism |
condannot |
The condition annotation for the selected organism |
In case switchVersion
is equal to 3:
exprdata |
the full compendium for the selected organism |
refannot |
The condition annotation for the reference contrasts |
testannot |
The condition annotation for the test contrasts |
http://colombos.net
1 2 3 4 5 | ## Not run:
library('Rcolombos')
hpylo <- getCompendium("hpylo")
## End(Not run)
|
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