Description Usage Arguments Value References Examples
This method allows to retrieve all the annotations for the Reference and Test conditions for a selected organism (nickname) and for a user specified contrast name. Please be aware that only one contrast is allowed in input. It returns a list containing both ReferenceAnnnotation and TestAnnotation. and return the available entities
1 2 | get_contrast_annotations(organism = "bsubt",
contrast_name = "GSM27217.ch2-vs-GSM27217.ch1")
|
organism |
A character containing the organism id: use |
contrast_name |
annotation A character containing the selected contrast_name type: use |
A list of two data.frame, ReferenceAnnnotation and TestAnnotation, containing 2 columns: both the properties and the values for the selected contrast
http://colombos.net
1 2 3 4 5 6 | ## Not run:
library("Rcolombos")
out <- get_contrast_annotations(organism="bsubt",
contrast_name="GSM27217.ch2-vs-GSM27217.ch1")
## End(Not run)
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