Files in SQMtools
Analyze Results Generated by the 'SqueezeMeta' Pipeline
MD5
NAMESPACE
DESCRIPTION
R/figures.R
R/summary_bunch.R
R/tax_methods.R
R/combineSQMlite.R
R/loadSQM.R
R/summary.R
R/Hadza.R
R/ext_bindings.R
R/subset_methods.R
R/extra_methods.R
R/mostVariable.R
R/MGKOs.R
R/mostAbundant.R
R/exportTable.R
R/exportSeqs.R
R/combineSQM.R
R/exportKrona.R
R/aggregate_methods.R
R/genericTable.R
R/USiCGs.R
R/summary_lite.R
R/RecA.R
R/exportPathway.R
R/zzz.R
R/MGOGs.R
R/seqvec2fasta.R
R/bin_methods.R
R/CheckMProkaryote.R
R/loadSQMlite.R
R/copy_number.R
inst/CITATION
build/partial.rdb
data/Hadza.RData
data/USiCGs.RData
data/MGOGs.RData
data/RecA.RData
data/CheckMProkaryote.RData
data/MGKOs.RData
man/exportTable.Rd
man/plotBars.Rd
man/subsetTax.Rd
man/RecA.Rd
man/combineSQMlite.Rd
man/subsetRand.Rd
man/exportKrona.Rd
man/Hadza.Rd
man/SQM_to_microeco.Rd
man/subsetContigs.Rd
man/loadSQM.Rd
man/mostVariable.Rd
man/subsetBins.Rd
man/combineSQM.Rd
man/summary.SQMbunch.Rd
man/plotBins.Rd
man/subsetORFs.Rd
man/rowMins.Rd
man/MGKOs.Rd
man/MGOGs.Rd
man/create_bin.Rd
man/exportBins.Rd
man/SQM_to_phyloseq.Rd
man/summary.SQMlite.Rd
man/mostAbundant.Rd
man/find_redundant_contigs.Rd
man/USiCGs.Rd
man/subsetSamples.Rd
man/exportContigs.Rd
man/remove_contigs_from_bin.Rd
man/summary.SQM.Rd
man/CheckMProkaryote.Rd
man/rowMaxs.Rd
man/plotTaxonomy.Rd
man/plotFunctions.Rd
man/seqvec2fasta.Rd
man/plotHeatmap.Rd
man/loadSQMlite.Rd
man/exportORFs.Rd
man/renameSamples.Rd
man/subsetFun.Rd
man/exportPathway.Rd
