computeMatTDist: Build a matrix indicating for each pairs of individuals how...
In TransPhylo: Inference of Transmission Tree from a Dated Phylogeny
Description
Usage
Arguments
Value
Description
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Usage
1
computeMatTDist(record, burnin = 0.5)
Arguments
record
Output from inferTTree function
burnin
Proportion of the MCMC output to be discarded as burnin
Value
Matrix of intermediates in transmission chains between pairs of hosts
TransPhylo documentation built on April 20, 2021, 5:09 p.m.
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Description Usage Arguments Value
Description
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Usage
1 | computeMatTDist(record, burnin = 0.5)
|
Arguments
record |
Output from inferTTree function |
burnin |
Proportion of the MCMC output to be discarded as burnin |
Value
Matrix of intermediates in transmission chains between pairs of hosts
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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