plotTraces: Plot MCMC traces
In TransPhylo: Inference of Transmission Tree from a Dated Phylogeny
Description
Usage
Arguments
Value
Description
Plot MCMC traces
Usage
1
plotTraces(record, burnin = 0, extend = F)
Arguments
record
Output from inferTTree function
burnin
Proportion of the MCMC output to be discarded as burnin
extend
Whether to also show traces of off.r and off.p
Value
Returns invisibly the first parameter
TransPhylo documentation built on April 20, 2021, 5:09 p.m.
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Description Usage Arguments Value
Description
Plot MCMC traces
Usage
1 | plotTraces(record, burnin = 0, extend = F)
|
Arguments
record |
Output from inferTTree function |
burnin |
Proportion of the MCMC output to be discarded as burnin |
extend |
Whether to also show traces of off.r and off.p |
Value
Returns invisibly the first parameter
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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