consTTree: Build a consensus transmission tree from a MCMC output
In TransPhylo: Inference of Transmission Tree from a Dated Phylogeny
Description
Usage
Arguments
Value
Description
Build a consensus transmission tree from a MCMC output
Usage
1
Arguments
record
Output from inferTTree function
burnin
Proportion of the MCMC output to be discarded as burnin
minimum
Minimum probability for inclusion of a partition in the consensus
debug
Used for debugging
Value
The consensus transmission tree
TransPhylo documentation built on April 20, 2021, 5:09 p.m.
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Description Usage Arguments Value
Description
Build a consensus transmission tree from a MCMC output
Usage
1 |
Arguments
record |
Output from inferTTree function |
burnin |
Proportion of the MCMC output to be discarded as burnin |
minimum |
Minimum probability for inclusion of a partition in the consensus |
debug |
Used for debugging |
Value
The consensus transmission tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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