GetproteinNetwork_all: Connect and parse stringdb information.

In UniprotR: Retrieving Information of Proteins from Uniprot

Connect and parse stringdb information.

Description

This function is connecting to stringdb and retrieve PPI between input list

Usage

GetproteinNetwork_all(ProteinAccList , directorypath = NULL, SpeciesID = 9606)

GetproteinNetwork_all(ProteinAccList , directorypath = NULL,SpeciesID = 9606)

Arguments

ProteinAccList	input a vector of UniProt Accession/s
directorypath	path to save excel file containig results returened by the function.
SpeciesID	Taxonomic id of accession's species ex. homo sapines 9606

Author(s)

Mohmed Soudy [e-mail] and Ali Mostafa [e-mail]

UniprotR documentation built on May 29, 2024, 1:08 a.m.