mantel.rtest: Mantel test (correlation between two distance matrices (in...
In ade4: Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
mantel.rtest R Documentation
Mantel test (correlation between two distance matrices (in R).)
Description
Performs a Mantel test between two distance matrices.
Usage
mantel.rtest(m1, m2, nrepet = 99, ...)
Arguments
m1
an object of class dist
m2
an object of class dist
nrepet
the number of permutations
...
further arguments passed to or from other methods
Value
an object of class rtest (randomization tests)
Author(s)
Daniel Chessel
Stéphane Dray stephane.dray@univ-lyon1.fr
References
Mantel, N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209–220.
Examples
data(yanomama)
gen <- quasieuclid(as.dist(yanomama$gen))
geo <- quasieuclid(as.dist(yanomama$geo))
plot(r1 <- mantel.rtest(geo,gen), main = "Mantel's test")
r1
ade4 documentation built on Feb. 16, 2023, 7:58 p.m.
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| mantel.rtest | R Documentation |
Mantel test (correlation between two distance matrices (in R).)
Description
Performs a Mantel test between two distance matrices.
Usage
mantel.rtest(m1, m2, nrepet = 99, ...)
Arguments
m1 |
an object of class |
m2 |
an object of class |
nrepet |
the number of permutations |
... |
further arguments passed to or from other methods |
Value
an object of class rtest (randomization tests)
Author(s)
Daniel Chessel
Stéphane Dray stephane.dray@univ-lyon1.fr
References
Mantel, N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209–220.
Examples
data(yanomama)
gen <- quasieuclid(as.dist(yanomama$gen))
geo <- quasieuclid(as.dist(yanomama$geo))
plot(r1 <- mantel.rtest(geo,gen), main = "Mantel's test")
r1
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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