ExampleTrees: Example Ig lineage trees

ExampleTreesR Documentation

Example Ig lineage trees

Description

A set of Ig lineage trees generated from the ExampleDb file, subset to only those trees with at least four nodes.

Usage

ExampleTrees

Format

A list of igraph objects output by buildPhylipLineage. Each node of each tree has the following annotations (vertex attributes):

  • sample_id: Sample identifier(s). Time in relation to vaccination.

  • c_call: Isotype assignment(s).

  • duplication_count: Copy count (number of duplicates) of the sequence.

See Also

ExampleTrees


alakazam documentation built on Sept. 30, 2023, 9:07 a.m.