getFilters: Retrieve All Available Filters for a Specific Dataset

Description Usage Arguments Author(s) See Also Examples

View source: R/getFilters.R

Description

This funcion queries the BioMart API and returns a table storing all available filters for a specific dataset.

Usage

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getFilters(mart, dataset)

Arguments

mart

a character string specifying the database (mart) for which datasets shall be listed.

dataset

a character string specifying the dataset for which filters shall be listed.

Author(s)

Hajk-Georg Drost

See Also

getMarts, getDatasets, getAttributes, organismBM, organismFilters, organismAttributes

Examples

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# search for available datasets
# getMarts()
# choose database (mart): "ENSEMBL_MART_ENSEMBL"
# head(getDatasets(mart = "ENSEMBL_MART_ENSEMBL"), 10)
# choose dataset: "hsapiens_gene_ensembl"
head(getFilters(mart = "ENSEMBL_MART_ENSEMBL", 
                dataset = "hsapiens_gene_ensembl") , 5)

biomartr documentation built on July 2, 2018, 1:02 a.m.