getFilters | R Documentation |
This funcion queries the BioMart API and returns a table storing all available filters for a specific dataset.
getFilters(mart, dataset, mute_citation = FALSE)
mart |
a character string specifying the database (mart) for which datasets shall be listed. |
dataset |
a character string specifying the dataset for which filters shall be listed. |
mute_citation |
logical value indicating whether citation message should be muted. |
Hajk-Georg Drost
getMarts
, getDatasets
,
getAttributes
, organismBM
,
organismFilters
, organismAttributes
## Not run:
# search for available datasets
# getMarts()
# choose database (mart): "ENSEMBL_MART_ENSEMBL"
# head(getDatasets(mart = "ENSEMBL_MART_ENSEMBL"), 10)
# choose dataset: "hsapiens_gene_ensembl"
head(getFilters(mart = "ENSEMBL_MART_ENSEMBL",
dataset = "hsapiens_gene_ensembl") , 5)
## End(Not run)
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