little.map.frame: Package of Simulated Marker Map Information

In bqtl: Bayesian QTL Mapping Toolkit

Package of Simulated Marker Map Information

Description

The little.map.frame data frame has 50 rows and 9 columns that describe the marker map of little.map.dx in the format produced by make.map.frame. little.map.dx has the minimal data needed to construct this.

Usage

data(little.map.frame)

Format

This data frame contains the following columns:

marker.name

a factor with levels m.1 m.2 ... m.50

cM

a vector of locations

prior

weights to be used in sampling and Bayesian computations

pos.type

a factor with levels left right center

is.marker

always TRUE for these data

pos.plot

a vector of plotting positions

lambda

transformed recombination fractions

locus

an abbreviated locus name

chr.num

the chromosome number 1, 2, 3, 4, or 5.

bqtl documentation built on Sept. 8, 2023, 5:44 p.m.