little.mf.5: Package of Simulated Marker Map Information

In bqtl: Bayesian QTL Mapping Toolkit

Package of Simulated Marker Map Information

Description

The little.mf.5 data frame has 114 rows and 9 columns consisting of little.map.frame plus 64 'virtual' marker loci

Usage

data(little.mf.5)

Format

This data frame contains the following columns:

marker.name

The marker names taken from little.map.frame and those created to fill virtual markers in between actual markers.

cM

a vector of locations

prior

weights to be used in sampling and Bayesian computations

pos.type

a factor with levels left right center

is.marker

TRUE for the 50 markers, FALSE for the 'virtual' markers

pos.plot

a vector of plotting positions

lambda

transformed recombination fractions

locus

an abbreviated locus name

chr.num

the chromosome number 1, 2, 3, 4, or 5.

bqtl documentation built on Sept. 25, 2024, 1:08 a.m.