Files in clinDataReview
Clinical Data Review Tool
MD5
NAMESPACE
DESCRIPTION
LICENSE
R/plots-utility-formatToHierarchicalData.R
R/plots-utility-layout.R
R/plots-utility-dimensions.R
R/plots-utility-formatPlotlyClinData.R
R/reporting-render-utility.R
R/dataManipulation-utility.R
R/plots-utility-axisLabels.R
R/init.R
R/reporting-skeleton.R
R/reporting-formats.R
R/reporting-templates.R
R/reporting-metadata.R
R/reporting-zipClinDataReviewReport.R
R/plots-tableClinData.R
R/dataManipulation-filterData.R
R/plots-utility-formatDataForPlotClinData.R
R/plots-timeProfileIntervalPlot.R
R/reporting-render-sessionInfo.R
R/miscellaneous.R
R/doc-clinDataReview-common-args-summaryStatsVis.R
R/dataManipulation-processData.R
R/plots-treemapClinData.R
R/reporting-render-params.R
R/reporting-render-html.R
R/doc-clinDataReview-common-args.R
R/plots-barplotClinData.R
R/dataManipulation-annotateData.R
R/plots-boxplotClinData.R
R/plots-scatterplotClinData.R
R/plots-sunburstClinData.R
R/plots-utility-getPlotTableVars.R
R/reporting-convertHtmlToAspx.R
R/plots-staticScatterplotClinData.R
R/reporting-utility.R
R/plots-utility-referenceLines.R
R/dataManipulation-transformData.R
R/reporting-render-general.R
R/plots-countClinData.R
R/reporting-render-md.R
R/plots-utility-checkValueType.R
R/plots-utility-axes.R
R/plots-errorbarClinData.R
inst/NEWS
inst/doc/clinDataReview-dataVisualization.Rmd
inst/doc/clinDataReview-reporting.html
inst/doc/clinDataReview-dataPreprocessing.html
inst/doc/clinDataReview-dataVisualization.R
inst/doc/clinDataReview-dataVisualization.html
inst/doc/clinDataReview-dataPreprocessing.R
inst/doc/clinDataReview-reporting.Rmd
inst/doc/clinDataReview-dataPreprocessing.Rmd
inst/doc/clinDataReview-reporting.R
inst/examples/metadata-example.R
inst/examples/filterData-example.R
inst/examples/annotateData-example.R
inst/examples/treemapClinData-example.R
inst/examples/sunburstClinData-example.R
inst/examples/scatterplotClinData-example.R
inst/examples/timeProfileIntervalPlot-example.R
inst/examples/errorbarClinData-example.R
inst/examples/boxplotClinData-example.R
inst/examples/processData-example.R
inst/examples/barplotClinData-example.R
inst/template/countsVisualizationTemplate.json
inst/template/divisionTemplate.Rmd
inst/template/plotTemplate.Rmd
inst/template/summaryPlotTemplate.Rmd
inst/template/plotTemplate.json
inst/template/summaryPlotTemplate.json
inst/template/listingTemplate.json
inst/template/listingTemplate.Rmd
inst/template/summaryTableTemplate.Rmd
inst/template/patientProfilesTemplate.json
inst/template/divisionTemplate.json
inst/template/patientProfilesTemplate.Rmd
inst/template/summaryTableTemplate.json
inst/template/countsVisualizationTemplate.Rmd
inst/js/FileSaver/FileSaver.min.js
inst/js/jszip/jszip.min.js
inst/js/jszip-utils/jszip-utils.min.js
inst/js/collapsibleButton/input.hideshow.js
inst/js/collapsibleButton/input.hideshow.css
inst/js/PatientProfiles/patientProfiles.js
inst/css/gitbook.css
inst/skeleton/index.Rmd
inst/skeleton/figures/logoText.svg
inst/skeleton/figures/treemap.png
inst/skeleton/figures/summaryTables.png
inst/skeleton/figures/subjectPlots.png
inst/skeleton/figures/subjectTables.png
inst/skeleton/config/config-laboratory-summaryBarplot.yml
inst/skeleton/config/config-adverseEvents-summaryTable-comparison.yml
inst/skeleton/config/config-subjectDisposition-division.yml
inst/skeleton/config/config-alert-division.yml
inst/skeleton/config/config-laboratory-eDISH-ALT.yml
inst/skeleton/config/config-adverseEvents-all-countsVisualization.yml
inst/skeleton/config/config-laboratory-spaghettiPlot-byVisit.yml
inst/skeleton/config/config-concomitantMedications-listing.yml
inst/skeleton/config/config-adverseEvents-timeProfiles.yml
inst/skeleton/config/config-enrollment-countsVisualization.yml
inst/skeleton/config/config-cumulativeEnrollment.yml
inst/skeleton/config/config-adverseEvents-listing-comparison.yml
inst/skeleton/config/config-adverseEvents-summaryTable.yml
inst/skeleton/config/config-concomitantMedications-division.yml
inst/skeleton/config/config-laboratory-spaghettiPlot.yml
inst/skeleton/config/config-adverseEvents-division.yml
inst/skeleton/config/config-patientProfiles.yml
inst/skeleton/config/config-alert-death.yml
inst/skeleton/config/config-demographics-summaryTable.yml
inst/skeleton/config/config-laboratory-division.yml
build/vignette.rds
tests/testthat.R
tests/files/index.Rmd
tests/files/_bookdown.yml
tests/files/fileCreation/interimFiles.R
tests/files/fileCreation/generalFiles.R
tests/files/interim/adverseEvents-division.md
tests/files/interim/index.rds
tests/files/interim/adverseEvents-division.rds
tests/files/interim/index.md
tests/files/config/config.yml
tests/files/config/config-adverseEvents-division.yml
tests/testthat/test_plotsUtilityFacets.R
tests/testthat/test_tableClinData.R
tests/testthat/test_templates.R
tests/testthat/test_miscellaneous.R
tests/testthat/test_convertReportToAspx.R
tests/testthat/test_utility-dimensions.R
tests/testthat/test_reportingUtility.R
tests/testthat/test_plotCountClinData.R
tests/testthat/test_annotateData.R
tests/testthat/test_plotlyUtilityFormatToHierarchicalData.R
tests/testthat/test_staticScatterplotClinData.R
tests/testthat/test_plotsUtilityFormatPlotlyClinData.R
tests/testthat/test_transformData.R
tests/testthat/test_sunburstClinData.R
tests/testthat/test_scatterplotClinData.R
tests/testthat/test_timeProfileIntervalPlot.R
tests/testthat/test_boxplotClinData.R
tests/testthat/helper_exampleDataScatter.R
tests/testthat/test_reportingTemplates.R
tests/testthat/test_metadata.R
tests/testthat/test_processData.R
tests/testthat/test_filterData.R
tests/testthat/test_errorbarClinData.R
tests/testthat/test_render_clinDataReviewReport.R
tests/testthat/test_treemapClinData.R
tests/testthat/test_barplotClinData.R
tests/testthat/test_skeleton.R
tests/testthat/test_knitPrint.R
tests/testthat/test_zipClinDataReviewReport.R
tests/testthat/test_getPlotTableVars.R
tests/testthat/test_getPathHyperlink.R
tests/testthat/test_reportingFormats.R
vignettes/.install_extras
vignettes/clinDataReview-dataVisualization.Rmd
vignettes/clinDataReview-reporting.Rmd
vignettes/clinDataReview-dataPreprocessing.Rmd
man/createMainConfigSkeleton.Rd
man/addReferenceLinesClinDataPlot.Rd
man/checkValueType.Rd
man/boxplotClinData.Rd
man/createPatientProfileVar.Rd
man/getParFctReferenceLines.Rd
man/merge.sessionInfo.Rd
man/getJsDepClinDataReview.Rd
man/renderFile.Rd
man/knit_print.clinDataReview.Rd
man/setFacetLayoutWrap.Rd
man/forceParams.Rd
man/checkChapterParallel.Rd
man/checkAvailabilityMetadata.Rd
man/formatPlotlyClinData.Rd
man/getSizePlot.Rd
man/countNLines.Rd
man/varToFm.Rd
man/knit_print.clinDataReviewMetadata.Rd
man/getDataReferenceLines.Rd
man/filterDataSingle.Rd
man/getFacetVars.Rd
man/zipClinDataReview.Rd
man/convertMdToHtml.Rd
man/clinDataReview-common-args-summaryStatsVis.Rd
man/formatPathDateInfoMetadata.Rd
man/clinDataReview-common-args.Rd
man/exportSessionInfoToMd.Rd
man/renderChapter.Rd
man/timeProfileIntervalPlot.Rd
man/print.clinDataReview.Rd
man/checkConfigFile.Rd
man/processData.Rd
man/sunburstClinData.Rd
man/clinDataReview-templates.Rd
man/addFacetPanel.Rd
man/getDimGgplot.Rd
man/addSelectBtn.Rd
man/moveXpt.Rd
man/addLayerToScatterPlot.Rd
man/checkReportTitles.Rd
man/transformData.Rd
man/createOutputYaml.Rd
man/getMdFromConfig.Rd
man/getPositionAndMargins.Rd
man/tableClinData.Rd
man/getFctTypeReferenceLines.Rd
man/combineButtonsAndPlot.Rd
man/getPathTemplate.Rd
man/createRedirectPage.Rd
man/setPaletteStaticScatterplotClinData.Rd
man/getFctCode.Rd
man/scatterplotClinData.Rd
man/JSONSchToRd.Rd
man/getIndexHTMLTitle.Rd
man/createTemplateDoc.Rd
man/getPathHyperlink.Rd
man/getInterimResFile.Rd
man/knitPrintClinDataReview.Rd
man/moveSkeletonFiles.Rd
man/filterData.Rd
man/getMdHeader.Rd
man/postProcessReport.Rd
man/clinDataReview-common-args-report.Rd
man/getTocNumbering.Rd
man/getHTMLToc.Rd
man/checkTemplatesName.Rd
man/errorbarClinData.Rd
man/collapseHtmlContent.Rd
man/getHeightLab.Rd
man/convertReportToAspx.Rd
man/layoutClinData.Rd
man/staticScatterplotClinData.Rd
man/getJitterVar.Rd
man/annotateData.Rd
man/formatHoverText.Rd
man/barplotClinData.Rd
man/treemapClinData.Rd
man/formatToHierarchicalData.Rd
man/renamePathDateInfoMetadata.Rd
man/gitbook_clinDataReview_report.Rd
man/formatDataForPlotClinData.Rd
man/getExtraDirs.Rd
man/getAxisLabs.Rd
man/createClinDataReviewReportSkeleton.Rd
man/createExampleMetadata.Rd
man/getMetadata.Rd
man/plotCountClinData.Rd
man/getAxisLimPlot.Rd
man/buildBook.Rd
man/splitChapter.Rd
man/getParamsFromConfig.Rd
man/getPlotTableVars.Rd
man/html_clinDataReview_report.Rd
man/addDateOfReportRun.Rd
man/render_clinDataReviewReport.Rd
