Files in colocboost

Multi-Context Colocalization Analysis for QTL and GWAS Studies

R/colocboost_update.R R/colocboost_assemble.R R/colocboost_output.R R/data.R R/colocboost_init.R R/colocboost_inference.R R/colocboost_assemble_cos.R R/colocboost_plot.R R/colocboost_utils.R R/colocboost_check_update_jk.R R/colocboost_one_causal.R R/colocboost_assemble_ucos.R R/qval.R R/colocboost_workhorse.R R/colocboost.R inst/doc/ColocBoost_Update.Rmd inst/doc/Ambiguous_Colocalization.Rmd inst/doc/Partial_Overlap_Variants.Rmd inst/doc/Input_Data_Format.R inst/doc/Interpret_ColocBoost_Output.R inst/doc/LD_Free_Colocalization.Rmd inst/doc/installation.R inst/doc/ColocBoost_Update.R inst/doc/Visualization_ColocBoost_Output.R inst/doc/Ambiguous_Colocalization.R inst/doc/Disease_Prioritized_Colocalization.Rmd inst/doc/installation.Rmd inst/doc/announcements.Rmd inst/doc/ColocBoost_Wrapper_Pipeline.Rmd inst/doc/Summary_Statistics_Colocalization.R inst/doc/FineBoost_Special_Case.Rmd inst/doc/Pairwise_Colocalization.Rmd inst/doc/Individual_Level_Colocalization.R inst/doc/Input_Data_Format.Rmd inst/doc/LD_Free_Colocalization.R inst/doc/Disease_Prioritized_Colocalization.R inst/doc/FineBoost_Special_Case.R inst/doc/Partial_Overlap_Variants.R inst/doc/Visualization_ColocBoost_Output.Rmd inst/doc/Pairwise_Colocalization.R inst/doc/ColocBoost_Wrapper_Pipeline.R inst/doc/Interpret_ColocBoost_Output.Rmd inst/doc/Summary_Statistics_Colocalization.Rmd inst/doc/Individual_Level_Colocalization.Rmd tests/testthat.R tests/README.md tests/testthat/test_one_causal.R tests/testthat/test_corner_cases.R tests/testthat/test_plot.R tests/testthat/test_inference.R tests/testthat/test_sumstats.R tests/testthat/test_colocboost.R tests/testthat/test_utils.R tests/testthat/test_model.R vignettes/ColocBoost_Update.Rmd vignettes/Ambiguous_Colocalization.Rmd vignettes/Partial_Overlap_Variants.Rmd vignettes/LD_Free_Colocalization.Rmd vignettes/Disease_Prioritized_Colocalization.Rmd vignettes/installation.Rmd vignettes/announcements.Rmd vignettes/ColocBoost_Wrapper_Pipeline.Rmd vignettes/FineBoost_Special_Case.Rmd vignettes/Pairwise_Colocalization.Rmd vignettes/Input_Data_Format.Rmd vignettes/Visualization_ColocBoost_Output.Rmd vignettes/Interpret_ColocBoost_Output.Rmd vignettes/Summary_Statistics_Colocalization.Rmd vignettes/Individual_Level_Colocalization.Rmd man/get_hierarchical_clusters.Rd man/colocboost.Rd man/Weaker_GWAS_Effect.Rd man/colocboost_plot.Rd man/Non_Causal_Strongest_Marginal.Rd man/get_cos_purity.Rd man/get_cormat.Rd man/get_colocboost_summary.Rd man/get_cos.Rd man/Ambiguous_Colocalization.Rd man/get_ucos_summary.Rd man/Ind_5traits.Rd man/Sumstat_5traits.Rd man/get_cos_summary.Rd man/get_ambiguous_colocalization.Rd man/Heterogeneous_Effect.Rd man/get_robust_colocalization.Rd