convert_phylo: Function to subset and convert phyloseq data

In corncob: Count Regression for Correlated Observations with the Beta-Binomial

Function to subset and convert phyloseq data

Description

Function to subset and convert phyloseq data

Usage

convert_phylo(data, select)

Arguments

data	a phyloseq object
select	Name of OTU or taxa to select, must match taxa name in data

Value

A data.frame object, with elements W as the observed counts, M as the sequencing depth, and the sample data with their original names.

corncob documentation built on May 29, 2024, 7:15 a.m.