dbetabin_neg: Negative betabinomial density

In corncob: Count Regression for Correlated Observations with the Beta-Binomial

Negative betabinomial density

Description

Created as a convenient helper function for optimization. Not intended for users.

Usage

dbetabin_neg(theta, W, M, X, X_star, np, npstar, link, phi.link, logpar = TRUE)

Arguments

theta	Numeric vector. Parameters associated with X and X_star
W	Numeric vector of counts
M	Numeric vector of sequencing depth
X	Matrix of covariates associated with abundance (including intercept)
X_star	Matrix of covariates associated with dispersion (including intercept)
np	Number of covariates associated with abundance (including intercept)
npstar	Number of covariates associated with dispersion (including intercept)
link	ink function for abundance covariates
phi.link	ink function for dispersion covariates
logpar	Boolean. Defaults to TRUE. Indicator of whether to return log-likelihood.

Value

Negative beta-binomial (log-)likelihood

corncob documentation built on May 29, 2024, 7:15 a.m.