ibd_phylo_sample: IBD data, sample data frame.
In corncob: Count Regression for Correlated Observations with the Beta-Binomial
ibd_phylo_sample R Documentation
IBD data, sample data frame.
Description
Sample data from a phyloseq object from an IBD microbiome study.
Usage
ibd_phylo_sample
Format
A data frame of sample data.
References
Papa, E., Docktor, M., Smillie, C., Weber, S., Preheim, S. P., Gevers, D., Giannoukos, G., Ciulla, D., Tabbaa, D., Ingram, J., Schauer, D. B., Ward, D. V., Korzenik, J. R., Xavier, R. J., Bousvaros, A., Alm, E. J. & Schauer, D. B. (2012). Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease. PloS One, 7(6), e39242. <doi.org/10.1371/journal.pone.0039242>.
Duvallet, C., Gibbons, S., Gurry, T., Irizarry, R., & Alm, E. (2017). MicrobiomeHD: the human gut microbiome in health and disease [Data set]. Zenodo. <doi.org/10.5281/zenodo.1146764>.
corncob documentation built on May 29, 2024, 7:15 a.m.
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| ibd_phylo_sample | R Documentation |
IBD data, sample data frame.
Description
Sample data from a phyloseq object from an IBD microbiome study.
Usage
ibd_phylo_sample
Format
A data frame of sample data.
References
Papa, E., Docktor, M., Smillie, C., Weber, S., Preheim, S. P., Gevers, D., Giannoukos, G., Ciulla, D., Tabbaa, D., Ingram, J., Schauer, D. B., Ward, D. V., Korzenik, J. R., Xavier, R. J., Bousvaros, A., Alm, E. J. & Schauer, D. B. (2012). Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease. PloS One, 7(6), e39242. <doi.org/10.1371/journal.pone.0039242>.
Duvallet, C., Gibbons, S., Gurry, T., Irizarry, R., & Alm, E. (2017). MicrobiomeHD: the human gut microbiome in health and disease [Data set]. Zenodo. <doi.org/10.5281/zenodo.1146764>.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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