Nothing
### This script plot X-Y protein production rates.
rm(list = ls())
suppressMessages(library(cubfits, quietly = TRUE))
source("00-set_env.r")
source(paste(prefix$code.plot, "u0-get_case_main.r", sep = ""))
### Plot.
for(i.case in case.names){
### All mcmc outputs.
fn.in <- paste(prefix$subset, i.case, ".rda", sep = "")
if(!file.exists(fn.in)){
cat(paste("File not found: ", fn.in, "\n", sep = ""))
next
}
load(fn.in)
medPhi <- apply(phi.mcmc, 2, median)
meanPhi <- apply(phi.mcmc, 2, mean)
### Plot.
fn.out <- paste(prefix$plot.diag, "medPhi_EPhi_", i.case, ".pdf", sep = "")
pdf(fn.out, width = 5, height = 5)
plotprxy(meanPhi, medPhi,
log10.x = FALSE, log10.y = FALSE,
xlab = "Mean of Phi", ylab = "Median of Phi",
main = "By Iteration")
mtext(paste(workflow.name, ", ", get.case.main(i.case, model), sep = ""),
line = 3, cex = 0.6)
mtext(date(), line = 2.5, cex = 0.4)
dev.off()
}
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