GetPhyloNr: Determine the number a 'Node' has after conversion to a phylo...

In data.tree: General Purpose Hierarchical Data Structure

Determine the number a Node has after conversion to a phylo object

Description

Use this function when plotting a Node as a phylo, e.g. to set custom labels to plot.

Usage

GetPhyloNr(x, type = c("node", "edge"))

Arguments

x	The Node
type	Either "node" (the default) or "edge" (to get the number of the edge from x to its parent)

Value

an integer representing the node

See Also

Other ape phylo conversions: as.Node.phylo(), as.phylo.Node()

Examples

library(ape)
library(data.tree)
data(acme)
ap <- as.phylo(acme)
#plot(ap)
#nodelabels("IT Dep.", GetPhyloNr(Climb(acme, "IT")))
#edgelabels("Good!", GetPhyloNr(Climb(acme, "IT", "Switch to R"), "edge"))

data.tree documentation built on Nov. 13, 2023, 1:08 a.m.