adpcr-class: Class '"adpcr"' - end-point array digital PCR experiments
In dpcR: Digital PCR Analysis

Description Details Slots Author(s) See Also Examples

A class specifically designed to contain results from end-point array digital PCR experiments. Data is represented as matrix, where each column describes different experiment. Type of data in all columns is specified in slot "type". Inherits from dpcr.

For more in-depth explanation of digital PCR data structure, see dpcr.

col_names: "character" vector naming columns in the array.
row_names: "character" vector naming rows in the array.
row_id: "integer" vector providing row indices of all runs.
col_id: "integer" vector providing column indices of all runs.
panel_id: "factor" naming the panel to which experiment belong.

Michal Burdukiewicz.

Data management: adpcr2panel, bind_dpcr, extract_run.

Plotting: plot_panel.

Tests: test_panel.

Simulation: sim_adpcr.

Real-time array digital PCR: rtadpcr.

Droplet digital PCR: dpcr.

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rand_array <- sim_adpcr(400, 1600, 100, pos_sums = FALSE, n_panels = 5)
one_rand_array <- extract_run(rand_array, 1)
plot_panel(one_rand_array, 40, 40)