Description Usage Arguments Details Value Note Author(s) See Also Examples
Extract runs from a codedpcr object while preserving all other attributes.
1 | extract_run(input, id)
|
input |
object of the class |
id |
vector of indices or names of runs. |
The extract_run
function allows to choose one or more panels from an
object of the adpcr
or dpcr
class
and save it without changing other attributes. It is the most recommended
method of extracting a subset from an array of panels, because it preserves
class and structure of the object in contrary to standard operator
Extract.
The object of the input's class (adpcr
or
dpcr
).
The standard Extract
operator x[i]
treats
dpcr objects as matrix
and extracts values without preserving other
attributies of the object.
Michal Burdukiewicz.
Opposite function: bind_dpcr
Extract multiple runs belonging to an experiment of assay:
extract_dpcr
1 2 3 4 5 6 7 8 9 10 | #sample extracting
panels <- sim_adpcr(10, 40, 1000, pos_sums = FALSE, n_panels = 50)
single_panel <- extract_run(panels, 5)
random_three <- extract_run(panels, sample.int(ncol(panels), 3))
all_but_one <- extract_run(panels, -5)
#the same for fluorescence data
fluos <- sim_dpcr(10, 40, 1000, pos_sums = FALSE, n_exp = 50,
fluo = list(0.1, 0))
single_fluo <- extract_run(fluos, 5)
|
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