Files in dpcR

Digital PCR Analysis

CHANGELOG

MD5

DESCRIPTION

README.md

NAMESPACE

inst/CITATION

inst/test_counts_gui/readme.md inst/test_counts_gui/server.R inst/test_counts_gui/ui.R inst/doc/overview.R

inst/doc/overview.html

inst/doc/overview.Rmd inst/dpcr_density_gui/server.R inst/dpcr_density_gui/ui.R inst/dpcReport/r_code_gen.R

inst/dpcReport/dpcR_logo.png

inst/dpcReport/input_file2.md

inst/dpcReport/ga.js

inst/dpcReport/report.css

inst/dpcReport/about.md inst/dpcReport/report_template.Rmd inst/dpcReport/server.R inst/dpcReport/input_file1.md inst/dpcReport/about.Rmd inst/dpcReport/server_data.R inst/dpcReport/download_report1.md

inst/dpcReport/dpcr.bib

inst/dpcReport/ui.R inst/dpcReport/plot_panel/plot_panel1.md inst/dpcReport/plot_panel/plot_panel0.md inst/dpcReport/plot_panel/subpanel_summary.R inst/dpcReport/plot_panel/test_panel.R inst/dpcReport/plot_panel/plot_panel2.md inst/dpcReport/plot_panel/plot_panel.R inst/dpcReport/data_summary/data_summary_table1.md inst/dpcReport/data_summary/summary_input.R

inst/dpcReport/www/copy_csv_xls.swf

inst/dpcReport/prob_distr/prob_distr4.md inst/dpcReport/prob_distr/prob_distr2.md inst/dpcReport/prob_distr/plot_density.R inst/dpcReport/prob_distr/prob_distr3.md inst/dpcReport/prob_distr/single_run_moments.R inst/dpcReport/prob_distr/prob_distr1.md inst/dpcReport/prob_distr/get_kn.R inst/dpcReport/summary_plots/summary_plot.R inst/dpcReport/summary_plots/data_summary_scatterchart1.md inst/dpcReport/summary_plots/summary_exprep_plot.R inst/dpcReport/summary_plots/data_summary_scatterchart2.md inst/dpcReport/test_counts/test_counts_group.R inst/dpcReport/test_counts/test_counts_plot.R inst/dpcReport/test_counts/test_counts1.md inst/dpcReport/test_counts/test_counts2.md inst/dpcReport/test_counts/test_counts_res.R inst/dpcReport/test_counts/test_counts3.md

vignettes/dpcR_logo.png

vignettes/coverage_poster.RData

vignettes/workflow.svg

vignettes/adpcr_comp.RData

vignettes/overview.Rmd

vignettes/dpcr.bib

vignettes/vig.RData

R/adpcr2panel.R R/calc_breaks.R R/sim_adpcr.R R/read_dpcr.R R/calc_coordinates.R R/calc_lambda.R R/dpcReport_gui.R R/sim_dpcr.R R/AUCtest.R R/dpcr_density.R R/adpcr2ppp.R R/get_k_n.R R/show_dpcr.R R/plot_vic_fam.R R/create_dpcr.R R/rtadpcr.R R/test_peaks.R R/dpcR-package.R R/qdpcr.R R/dpcr_calculator.R R/sim_ddpcr_bkm.R R/read_amp.R R/bioamp.R R/hsm.R R/qpcr_analyser.R R/count_test-class.R R/plot_vf_circ.R R/pds_raw.R R/plot_distr.R R/ddpcRquant.R R/many_peaks.R R/dpcr_density_gui.R R/modlist.R R/dpcr2df.R R/test_pooled.R R/BioradCNV.R R/limit_cq.R R/pds.R R/simulations.R R/moments.R R/rename_dpcr.R R/test_panel.R R/fit_adpcr.R R/valid_amp.R R/safe_efficiency.R R/dpcr_density_table.R R/test_counts.R R/y_val_conf.R R/dPCRmethyl.R R/qpcr2pp.R R/num2int.R R/print_summary.R R/White.R R/test_counts_gui.R R/binarize.R R/summary_dpcr.R R/extract_run.R R/bind_dpcr.R R/classes.R R/compare_dens.R R/df2dpcr.R R/six_panels.R R/fl.R R/plot_panel.R man/sim_dpcr.Rd man/White.Rd man/dpcr-class.Rd man/many_peaks.Rd man/dpcReport.Rd man/BioradCNV.Rd man/dpcr2df-methods.Rd man/dpcr_density.Rd man/compare_dens.Rd man/read_dpcr.Rd man/read_QX200.Rd man/test_peaks.Rd man/create_dpcr.Rd man/rename_dpcr.Rd man/ddpcRquant.Rd man/moments-methods.Rd man/plot.qdpcr.Rd man/plot_panel.Rd man/df2dpcr.Rd man/qpcr2pp.Rd man/limit_cq.Rd man/dpcr_density_gui.Rd man/read_amp.Rd man/calc_coordinates.Rd man/plot_vic_fam.Rd man/show-methods.Rd man/pds.Rd man/qdpcr-class.Rd man/pds_raw.Rd man/dpcR-package.Rd man/rtadpcr-class.Rd man/qpcr_analyser.Rd man/test_counts.Rd man/summary-methods.Rd man/test_counts_gui.Rd man/adpcr2ppp.Rd man/bioamp.Rd man/count_test-class.Rd man/test_panel.Rd man/adpcr2panel.Rd man/sim_adpcr.Rd man/binarize.Rd man/test_pooled.Rd man/adpcr-class.Rd man/extract_dpcr.Rd man/six_panels.Rd man/read_QX100.Rd man/extract_run.Rd man/num2int.Rd man/read_BioMark.Rd man/read_redf.Rd man/dpcr_density_table.Rd man/bind_dpcr-methods.Rd man/dPCRmethyl.Rd

build/vignette.rds

data/pds.rda

data/White.rda

data/dPCRmethyl.rda

data/six_panels.rda

data/BioradCNV.rda

data/pds_raw.rda

data/many_peaks.rda

dpcR documentation built on May 2, 2019, 7:04 a.m.