tools/testModels.R

args <- commandArgs(trailingOnly = TRUE)
if (any(args == 'gctorture')) {
	gctorture(TRUE)
	cat("*** GCTORTURE ENABLED ***\n");
}

library(dynr)



directories <- c('inst/models/passing', 'demo')

if (any(args == 'slow')) {
	directories <- c(directories, 'inst/models/slow')
}
if (any(args == 'failing')) {
	directories <- c('inst/models/failing')
}

null <- tryCatch(suppressWarnings(file('/dev/null', 'w')),  
	error = function(e) { file('nul', 'w') } )


sink(null, type = 'output')


files <- list.files(directories, pattern = '^.+[.]R$',
				full.names = TRUE, recursive = TRUE)




errors <- list()
warnRec <- list()
runtimes <- numeric()

errorRecover <- function(script, opt, index) {
	sink(type = 'output')
	cat(paste(opt, index, "of",
		length(files), script, "...\n"))
	sink(null, type = 'output')
	start <- Sys.time()
	
	tryCatch.W.E <- function(expr) {
		W <- list()
		w.handler <- function(w) { # warning handler
			W[[1 + length(W)]] <<- w
			invokeRestart("muffleWarning")
		}
		list(value = withCallingHandlers(tryCatch(expr, error = function(e) e),
                                     warning = w.handler), warning = W)
	}
	
	got <- tryCatch.W.E(source(script, chdir = TRUE))
  
	stop.tm <- Sys.time()
	timeDifference <- stop.tm - start
	runtimes[[paste(opt,script,sep=":")]] <<- as.double(timeDifference, units = "secs")
	
	err <- got$value
	if (is(err, "error") && err$message != 'SKIP') {
		errors[[opt]][[script]] <<- err$message
		sink(type = 'output')
		cat("*** ERROR from", script, '***\n')
		print(err$message)
		sink(null, type = 'output')
	}
	warnRec[[opt]][[script]] <<- got$warning
	
	rm(envir=globalenv(), 
		list=setdiff(ls(envir=globalenv()), 
			c('warnRec', 'errors', 'errorRecover', 'opt', 'null', 'files', 'directories', 'runtimes')))
}


optimizers <- c('SLSQP')

for (opt in optimizers) {
	errors[[opt]] <- list()
	warnRec[[opt]] <- list()
	if (length(files) > 0) {
		for (i in 1:length(files)) {
			errorRecover(files[[i]], opt, i)
		}
	}
}	

sink(type = 'output')
close(null)

totalErrors <- sum(sapply(errors, length))
cat("Number of errors:", totalErrors, '\n')
if (totalErrors > 0) {
	for (opt in names(errors)) {
		oerr <- errors[[opt]]
		fileName <- names(oerr)
		if (length(oerr)) for (i in 1:length(oerr)) {
			cat("Error", opt, fileName[[i]], '***\n')
			print(oerr[[i]])
			cat('\n')
		}
	}
} else {
	for (opt in names(warnRec)) {
		owarn <- warnRec[[opt]]
		count <- sapply(owarn, length)
    if (any(count > 0)) {
      cat("**", opt ,"total warnings =", sum(count), "\n", fill=TRUE)
      wscript <- names(owarn[count > 0])
      for (ws1 in wscript) {
        cat("*", opt, "warnings from", ws1, "\n", fill=TRUE)
        wlist <- owarn[[ws1]]
        for (w1 in wlist) {
          cat(paste("  ", w1), fill=TRUE)
        }
      }
    }
	}
}

write.csv(as.data.frame(runtimes), "runtimes.csv")

cat("Finished testing models.\n")
quit(status=totalErrors)

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dynr documentation built on Aug. 21, 2017, 9:02 a.m.