Nothing
args <- commandArgs(trailingOnly = TRUE)
if (any(args == 'gctorture')) {
gctorture(TRUE)
cat("*** GCTORTURE ENABLED ***\n");
}
library(dynr)
directories <- c('inst/models/passing', 'demo')
if (any(args == 'slow')) {
directories <- c(directories, 'inst/models/slow')
}
if (any(args == 'failing')) {
directories <- c('inst/models/failing')
}
null <- tryCatch(suppressWarnings(file('/dev/null', 'w')),
error = function(e) { file('nul', 'w') } )
sink(null, type = 'output')
files <- list.files(directories, pattern = '^.+[.]R$',
full.names = TRUE, recursive = TRUE)
errors <- list()
warnRec <- list()
runtimes <- numeric()
errorRecover <- function(script, opt, index) {
sink(type = 'output')
cat(paste(opt, index, "of",
length(files), script, "...\n"))
sink(null, type = 'output')
start <- Sys.time()
tryCatch.W.E <- function(expr) {
W <- list()
w.handler <- function(w) { # warning handler
W[[1 + length(W)]] <<- w
invokeRestart("muffleWarning")
}
list(value = withCallingHandlers(tryCatch(expr, error = function(e) e),
warning = w.handler), warning = W)
}
got <- tryCatch.W.E(source(script, chdir = TRUE))
stop.tm <- Sys.time()
timeDifference <- stop.tm - start
runtimes[[paste(opt,script,sep=":")]] <<- as.double(timeDifference, units = "secs")
err <- got$value
if (is(err, "error") && err$message != 'SKIP') {
errors[[opt]][[script]] <<- err$message
sink(type = 'output')
cat("*** ERROR from", script, '***\n')
print(err$message)
sink(null, type = 'output')
}
warnRec[[opt]][[script]] <<- got$warning
rm(envir=globalenv(),
list=setdiff(ls(envir=globalenv()),
c('warnRec', 'errors', 'errorRecover', 'opt', 'null', 'files', 'directories', 'runtimes')))
}
optimizers <- c('SLSQP')
for (opt in optimizers) {
errors[[opt]] <- list()
warnRec[[opt]] <- list()
if (length(files) > 0) {
for (i in 1:length(files)) {
errorRecover(files[[i]], opt, i)
}
}
}
sink(type = 'output')
close(null)
totalErrors <- sum(sapply(errors, length))
cat("Number of errors:", totalErrors, '\n')
if (totalErrors > 0) {
for (opt in names(errors)) {
oerr <- errors[[opt]]
fileName <- names(oerr)
if (length(oerr)) for (i in 1:length(oerr)) {
cat("Error", opt, fileName[[i]], '***\n')
print(oerr[[i]])
cat('\n')
}
}
} else {
for (opt in names(warnRec)) {
owarn <- warnRec[[opt]]
count <- sapply(owarn, length)
if (any(count > 0)) {
cat("**", opt ,"total warnings =", sum(count), "\n", fill=TRUE)
wscript <- names(owarn[count > 0])
for (ws1 in wscript) {
cat("*", opt, "warnings from", ws1, "\n", fill=TRUE)
wlist <- owarn[[ws1]]
for (w1 in wlist) {
cat(paste(" ", w1), fill=TRUE)
}
}
}
}
}
write.csv(as.data.frame(runtimes), "runtimes.csv")
cat("Finished testing models.\n")
quit(status=totalErrors)
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