lower.upper: Calculates lower band and upper band

In epistasis: Detecting Epistatic Selection with Partially Observed Genotype Data

Description

Calculates lower and upper bands for each data point, using a set of cut-points which is obtained from the Gaussian copula.

Usage

lower.upper(y)

Arguments

y	An (n \times p) matrix or a data.frame corresponding to the data matrix (n is the sample size and p is the number of variables). It also could be an object of class "episim".

Value

lower	A n by p matrix representing the lower band for each data point.
upper	A n by p matrix representing the upper band for each data point.

Author(s)

Pariya Behrouzi and Ernst C. Wit
Maintainer: Pariya Behrouzi <[e-mail]>

References

P. Behrouzi and E. C. Wit. Detecting Epistatic Selection with Partially Observed Genotype Data Using Copula Graphical Models. arXiv, 2016.

See Also

cutoffs and epistasis-package.

Examples

## Not run: 
D <- episim(p = 100, n = 50, k = 3)
lower.upper(D$data)

## End(Not run)

epistasis documentation built on May 2, 2019, 5:09 a.m.