Nothing
#' Fit best ARIMA model to univariate time series
#'
#' Returns best ARIMA model according to either AIC, AICc or BIC value. The
#' function conducts a search over possible models within the order constraints
#' provided.
#'
#' The default arguments are designed for rapid estimation of models for many time series.
#' If you are analysing just one time series, and can afford to take some more time, it
#' is recommended that you set `stepwise = FALSE` and `approximation = FALSE`.
#'
#' Non-stepwise selection can be slow, especially for seasonal data. The stepwise
#' algorithm outlined in Hyndman & Khandakar (2008) is used except that the default
#' method for selecting seasonal differences is now based on an estimate of seasonal
#' strength (Wang, Smith & Hyndman, 2006) rather than the Canova-Hansen test.
#' There are also some other minor variations to the algorithm described in
#' Hyndman and Khandakar (2008).
#'
#' @inheritParams Arima
#' @param d Order of first-differencing. If missing, will choose a value based
#' on `test`.
#' @param D Order of seasonal-differencing. If missing, will choose a value
#' based on `season.test`.
#' @param max.p Maximum value of p.
#' @param max.q Maximum value of q.
#' @param max.P Maximum value of P.
#' @param max.Q Maximum value of Q.
#' @param max.order Maximum value of p+q+P+Q if model selection is not
#' stepwise.
#' @param max.d Maximum number of non-seasonal differences.
#' @param max.D Maximum number of seasonal differences.
#' @param start.p Starting value of p in stepwise procedure.
#' @param start.q Starting value of q in stepwise procedure.
#' @param start.P Starting value of P in stepwise procedure.
#' @param start.Q Starting value of Q in stepwise procedure.
#' @param stationary If `TRUE`, restricts search to stationary models.
#' @param seasonal If `FALSE`, restricts search to non-seasonal models.
#' @param ic Information criterion to be used in model selection.
#' @param stepwise If `TRUE`, will do stepwise selection (faster).
#' Otherwise, it searches over all models. Non-stepwise selection can be very
#' slow, especially for seasonal models.
#' @param nmodels Maximum number of models considered in the stepwise search.
#' @param trace If `TRUE`, the list of ARIMA models considered will be
#' reported.
#' @param approximation If `TRUE`, estimation is via conditional sums of
#' squares and the information criteria used for model selection are
#' approximated. The final model is still computed using maximum likelihood
#' estimation. Approximation should be used for long time series or a high
#' seasonal period to avoid excessive computation times.
#' @param truncate An integer value indicating how many observations to use in
#' model selection. The last `truncate` values of the series are used to
#' select a model when `truncate` is not `NULL` and
#' `approximation = TRUE`. All observations are used if either
#' `truncate = NULL` or `approximation = FALSE`.
#' @param test Type of unit root test to use. See [ndiffs()] for details.
#' @param test.args Additional arguments to be passed to the unit root test.
#' @param seasonal.test This determines which method is used to select the number of seasonal differences.
#' The default method is to use a measure of seasonal strength computed from an STL decomposition.
#' Other possibilities involve seasonal unit root tests.
#' @param seasonal.test.args Additional arguments to be passed to the seasonal
#' unit root test.
#' See [nsdiffs()] for details.
#' @param allowdrift If `TRUE`, models with drift terms are considered.
#' @param allowmean If `TRUE`, models with a non-zero mean are considered.
#' @param parallel If `TRUE` and `stepwise = FALSE`, then the specification
#' search is done in parallel via [parallel::mclapply()]. This can give a
#' significant speedup on multicore machines. On Windows, this option always
#' fails because forking is not supported.
#' @param num.cores Allows the user to specify the amount of parallel processes
#' to be used if `parallel = TRUE` and `stepwise = FALSE`. If `NULL`, then the
#' number of logical cores is automatically detected and all available cores
#' are used.
#'
#' @return Same as for [Arima()]
#' @author Rob J Hyndman
#' @seealso [Arima()]
#' @references Hyndman, RJ and Khandakar, Y (2008) "Automatic time series
#' forecasting: The forecast package for R", \emph{Journal of Statistical
#' Software}, \bold{26}(3).
#'
#' Wang, X, Smith, KA, Hyndman, RJ (2006) "Characteristic-based clustering
#' for time series data", \emph{Data Mining and Knowledge Discovery},
#' \bold{13}(3), 335-364.
#' @keywords ts
#' @examples
#' fit <- auto.arima(WWWusage)
#' plot(forecast(fit, h = 20))
#'
#' @export
auto.arima <- function(
y,
d = NA,
D = NA,
max.p = 5,
max.q = 5,
max.P = 2,
max.Q = 2,
max.order = 5,
max.d = 2,
max.D = 1,
start.p = 2,
start.q = 2,
start.P = 1,
start.Q = 1,
stationary = FALSE,
seasonal = TRUE,
ic = c("aicc", "aic", "bic"),
stepwise = TRUE,
nmodels = 94,
trace = FALSE,
approximation = (length(x) > 150 || frequency(x) > 12),
method = NULL,
truncate = NULL,
xreg = NULL,
test = c("kpss", "adf", "pp"),
test.args = list(),
seasonal.test = c("seas", "ocsb", "hegy", "ch"),
seasonal.test.args = list(),
allowdrift = TRUE,
allowmean = TRUE,
lambda = NULL,
biasadj = FALSE,
parallel = FALSE,
num.cores = 2,
x = y,
...
) {
# Only non-stepwise parallel implemented so far.
if (stepwise && parallel) {
warning(
"Parallel computer is only implemented when stepwise=FALSE, the model will be fit in serial."
)
parallel <- FALSE
}
if (trace && parallel) {
message("Tracing model searching in parallel is not supported.")
trace <- FALSE
}
series <- deparse1(substitute(y))
x <- as.ts(x)
if (NCOL(x) > 1) {
stop("auto.arima can only handle univariate time series")
}
# Trim leading NAs and find length of non-missing data
orig.x <- x
missing <- is.na(x)
firstnonmiss <- head(which(!missing), 1)
lastnonmiss <- tail(which(!missing), 1)
serieslength <- sum(!missing[firstnonmiss:lastnonmiss])
# Trim initial missing values
x <- subset(x, start = firstnonmiss)
if (!is.null(xreg)) {
if (!is.numeric(xreg)) {
stop("xreg should be a numeric matrix or a numeric vector")
}
xreg <- as.matrix(xreg)
xreg <- xreg[firstnonmiss:NROW(xreg), , drop = FALSE]
}
# Check for constant data
if (is.constant(x)) {
if (all(is.na(x))) {
stop("All data are missing")
}
if (allowmean) {
fit <- Arima(x, order = c(0, 0, 0), fixed = mean(x, na.rm = TRUE), ...)
} else {
fit <- Arima(x, order = c(0, 0, 0), include.mean = FALSE, ...)
}
fit$x <- orig.x
fit$series <- series
fit$call <- match.call()
fit$call$x <- data.frame(x = x, check.names = FALSE)
fit$constant <- TRUE
return(fit)
}
ic <- match.arg(ic)
test <- match.arg(test)
seasonal.test <- match.arg(seasonal.test)
# Only consider non-seasonal models
if (seasonal) {
m <- frequency(x)
} else {
m <- 1
}
if (m < 1) {
# warning("I can't handle data with frequency less than 1. Seasonality will be ignored.")
m <- 1
} else {
m <- round(m)
} # Avoid non-integer seasonal periods
max.p <- min(max.p, floor(serieslength / 3))
max.q <- min(max.q, floor(serieslength / 3))
max.P <- min(max.P, floor(serieslength / 3 / m))
max.Q <- min(max.Q, floor(serieslength / 3 / m))
# Use AIC if npar <= 3
# AICc won't work for tiny samples.
if (serieslength <= 3L) {
ic <- "aic"
}
# Transform data if requested
if (!is.null(lambda)) {
x <- BoxCox(x, lambda)
lambda <- attr(x, "lambda")
attr(lambda, "biasadj") <- biasadj
}
# Check xreg and do regression if necessary
if (!is.null(xreg)) {
if (is.null(colnames(xreg))) {
colnames(xreg) <- if (ncol(xreg) == 1) {
"xreg"
} else {
paste0("xreg", seq_len(ncol(xreg)))
}
}
xregg <- xreg
xx <- x
# Check that xreg is not rank deficient
# First check if any columns are constant
constant_columns <- apply(xregg, 2, is.constant)
if (all(constant_columns)) {
xregg <- NULL
} else {
if (any(constant_columns)) {
xregg <- xregg[, -which(constant_columns), drop = FALSE]
}
# Now check if it is rank deficient
sv <- svd(na.omit(cbind(rep(1, NROW(xregg)), xregg)))$d
if (min(sv) / sum(sv) < .Machine$double.eps) {
stop("xreg is rank deficient")
}
# Finally find residuals from regression in order
# to estimate appropriate level of differencing
j <- !is.na(x) & !is.na(rowSums(xregg))
xx[j] <- residuals(lm(x ~ xregg))
}
} else {
xx <- x
xregg <- NULL
}
# Choose order of differencing
if (stationary) {
d <- D <- 0
}
if (m == 1) {
D <- max.P <- max.Q <- 0
} else if (is.na(D) && length(xx) <= 2 * m) {
D <- 0
} else if (is.na(D)) {
D <- do.call(
nsdiffs,
c(list(xx, test = seasonal.test, max.D = max.D), seasonal.test.args)
)
# Make sure xreg is not null after differencing
if (D > 0 && !is.null(xregg)) {
diffxreg <- diff(xregg, differences = D, lag = m)
if (any(apply(diffxreg, 2, is.constant))) {
D <- D - 1
}
}
# Make sure xx is not all missing after differencing
if (D > 0) {
dx <- diff(xx, differences = D, lag = m)
if (all(is.na(dx))) {
D <- D - 1
}
}
}
if (D > 0) {
dx <- diff(xx, differences = D, lag = m)
} else {
dx <- xx
}
if (!is.null(xregg)) {
if (D > 0) {
diffxreg <- diff(xregg, differences = D, lag = m)
} else {
diffxreg <- xregg
}
}
if (is.na(d)) {
d <- do.call(ndiffs, c(list(dx, test = test, max.d = max.d), test.args))
# Make sure xreg is not null after differencing
if (d > 0 && !is.null(xregg)) {
diffxreg <- diff(diffxreg, differences = d, lag = 1)
if (any(apply(diffxreg, 2, is.constant))) {
d <- d - 1
}
}
# Make sure dx is not all missing after differencing
if (d > 0) {
diffdx <- diff(dx, differences = d, lag = 1)
if (all(is.na(diffdx))) {
d <- d - 1
}
}
}
# Check number of differences selected
if (D >= 2) {
warning(
"Having more than one seasonal differences is not recommended. Please consider using only one seasonal difference."
)
} else if (D + d > 2) {
warning(
"Having 3 or more differencing operations is not recommended. Please consider reducing the total number of differences."
)
}
if (d > 0) {
dx <- diff(dx, differences = d, lag = 1)
}
if (length(dx) == 0L) {
stop("Not enough data to proceed")
} else if (is.constant(dx)) {
if (is.null(xreg)) {
if (D > 0 && d == 0) {
fit <- Arima(
x,
order = c(0, d, 0),
seasonal = list(order = c(0, D, 0), period = m),
include.constant = TRUE,
fixed = mean(dx / m, na.rm = TRUE),
method = method,
...
)
} else if (D > 0 && d > 0) {
fit <- Arima(
x,
order = c(0, d, 0),
seasonal = list(order = c(0, D, 0), period = m),
method = method,
...
)
} else if (d == 2) {
fit <- Arima(x, order = c(0, d, 0), method = method, ...)
} else if (d < 2) {
fit <- Arima(
x,
order = c(0, d, 0),
include.constant = TRUE,
fixed = mean(dx, na.rm = TRUE),
method = method,
...
)
} else {
stop(
"Data follow a simple polynomial and are not suitable for ARIMA modelling."
)
}
} else {
# Perfect regression
if (D > 0) {
fit <- Arima(
x,
order = c(0, d, 0),
seasonal = list(order = c(0, D, 0), period = m),
xreg = xreg,
method = method,
...
)
} else {
fit <- Arima(x, order = c(0, d, 0), xreg = xreg, method = method, ...)
}
}
fit$x <- orig.x
fit$series <- series
fit$call <- match.call()
fit$call$x <- data.frame(x = x, check.names = FALSE)
return(fit)
}
if (m > 1) {
if (max.P > 0) {
max.p <- min(max.p, m - 1)
}
if (max.Q > 0) {
max.q <- min(max.q, m - 1)
}
}
# Find constant offset for AIC calculation using white noise model
if (approximation) {
if (!is.null(truncate)) {
tspx <- tsp(x)
if (length(x) > truncate) {
x <- ts(tail(x, truncate), end = tspx[2], frequency = tspx[3])
}
}
if (D == 0) {
fit <- try(
stats::arima(x, order = c(0, d, 0), xreg = xreg, ...),
silent = TRUE
)
} else {
fit <- try(
stats::arima(
x,
order = c(0, d, 0),
seasonal = list(order = c(0, D, 0), period = m),
xreg = xreg,
...
),
silent = TRUE
)
}
if (!inherits(fit, "try-error")) {
offset <- -2 * fit$loglik - serieslength * log(fit$sigma2)
} else {
# Not sure this should ever happen
# warning("Unable to calculate AIC offset")
offset <- 0
}
} else {
offset <- 0
}
allowdrift <- allowdrift && (d + D) == 1
allowmean <- allowmean && (d + D) == 0
constant <- allowdrift || allowmean
if (approximation && trace) {
cat("\n Fitting models using approximations to speed things up...\n")
}
if (!stepwise) {
bestfit <- search.arima(
x,
d,
D,
max.p,
max.q,
max.P,
max.Q,
max.order,
stationary,
ic,
trace,
approximation,
method = method,
xreg = xreg,
offset = offset,
allowdrift = allowdrift,
allowmean = allowmean,
parallel = parallel,
num.cores = num.cores,
...
)
bestfit$call <- match.call()
bestfit$call$x <- data.frame(x = x, check.names = FALSE)
bestfit$lambda <- lambda
bestfit$x <- orig.x
bestfit$series <- series
bestfit$fitted <- fitted.Arima(bestfit)
if (trace) {
cat("\n\n Best model:", arima.string(bestfit, padding = TRUE), "\n\n")
}
return(bestfit)
}
# Starting model
if (length(x) < 10L) {
start.p <- min(start.p, 1L)
start.q <- min(start.q, 1L)
start.P <- 0L
start.Q <- 0L
}
p <- start.p <- min(start.p, max.p)
q <- start.q <- min(start.q, max.q)
P <- start.P <- min(start.P, max.P)
Q <- start.Q <- min(start.Q, max.Q)
results <- matrix(NA, nrow = nmodels, ncol = 8)
bestfit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[1, ] <- c(p, d, q, P, D, Q, constant, bestfit$ic)
# Null model with possible constant
fit <- myarima(
x,
order = c(0, d, 0),
seasonal = c(0, D, 0),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[2, ] <- c(0, d, 0, 0, D, 0, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- q <- P <- Q <- 0
}
k <- 2
# Basic AR model
if (max.p > 0 || max.P > 0) {
fit <- myarima(
x,
order = c(max.p > 0, d, 0),
seasonal = c((m > 1) && (max.P > 0), D, 0),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k + 1, ] <- c(
max.p > 0,
d,
0,
(m > 1) && (max.P > 0),
D,
0,
constant,
fit$ic
)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- (max.p > 0)
P <- (m > 1) && (max.P > 0)
q <- Q <- 0
}
k <- k + 1
}
# Basic MA model
if (max.q > 0 || max.Q > 0) {
fit <- myarima(
x,
order = c(0, d, max.q > 0),
seasonal = c(0, D, (m > 1) && (max.Q > 0)),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k + 1, ] <- c(
0,
d,
max.q > 0,
0,
D,
(m > 1) && (max.Q > 0),
constant,
fit$ic
)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- P <- 0
Q <- (m > 1) && (max.Q > 0)
q <- (max.q > 0)
}
k <- k + 1
}
# Null model with no constant
if (constant) {
fit <- myarima(
x,
order = c(0, d, 0),
seasonal = c(0, D, 0),
constant = FALSE,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k + 1, ] <- c(0, d, 0, 0, D, 0, 0, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- q <- P <- Q <- 0
}
k <- k + 1
}
startk <- 0
while (startk < k && k < nmodels) {
startk <- k
if (P > 0 && newmodel(p, d, q, P - 1, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P - 1, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P - 1, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
P <- (P - 1)
next
}
}
if (Q > 0 && newmodel(p, d, q, P, D, Q - 1, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P, D, Q - 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P, D, Q - 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q - 1)
next
}
}
if (P < max.P && newmodel(p, d, q, P + 1, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P + 1, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P + 1, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
P <- (P + 1)
next
}
}
if (Q < max.Q && newmodel(p, d, q, P, D, Q + 1, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P, D, Q + 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P, D, Q + 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q + 1)
next
}
}
if (
Q > 0 &&
P > 0 &&
newmodel(p, d, q, P - 1, D, Q - 1, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P - 1, D, Q - 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P - 1, D, Q - 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q - 1)
P <- (P - 1)
next
}
}
if (
Q < max.Q &&
P > 0 &&
newmodel(p, d, q, P - 1, D, Q + 1, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P - 1, D, Q + 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P - 1, D, Q + 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q + 1)
P <- (P - 1)
next
}
}
if (
Q > 0 &&
P < max.P &&
newmodel(p, d, q, P + 1, D, Q - 1, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P + 1, D, Q - 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P + 1, D, Q - 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q - 1)
P <- (P + 1)
next
}
}
if (
Q < max.Q &&
P < max.P &&
newmodel(p, d, q, P + 1, D, Q + 1, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P + 1, D, Q + 1),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P + 1, D, Q + 1, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
Q <- (Q + 1)
P <- (P + 1)
next
}
}
if (p > 0 && newmodel(p - 1, d, q, P, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p - 1, d, q),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p - 1, d, q, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- (p - 1)
next
}
}
if (q > 0 && newmodel(p, d, q - 1, P, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q - 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q - 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q - 1)
next
}
}
if (p < max.p && newmodel(p + 1, d, q, P, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p + 1, d, q),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p + 1, d, q, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
p <- (p + 1)
next
}
}
if (q < max.q && newmodel(p, d, q + 1, P, D, Q, constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q + 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q + 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q + 1)
next
}
}
if (
q > 0 &&
p > 0 &&
newmodel(p - 1, d, q - 1, P, D, Q, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p - 1, d, q - 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p - 1, d, q - 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q - 1)
p <- (p - 1)
next
}
}
if (
q < max.q &&
p > 0 &&
newmodel(p - 1, d, q + 1, P, D, Q, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p - 1, d, q + 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p - 1, d, q + 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q + 1)
p <- (p - 1)
next
}
}
if (
q > 0 &&
p < max.p &&
newmodel(p + 1, d, q - 1, P, D, Q, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p + 1, d, q - 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p + 1, d, q - 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q - 1)
p <- (p + 1)
next
}
}
if (
q < max.q &&
p < max.p &&
newmodel(p + 1, d, q + 1, P, D, Q, constant, results[1:k, ])
) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p + 1, d, q + 1),
seasonal = c(P, D, Q),
constant = constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p + 1, d, q + 1, P, D, Q, constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
q <- (q + 1)
p <- (p + 1)
next
}
}
if (allowdrift || allowmean) {
if (newmodel(p, d, q, P, D, Q, !constant, results[1:k, ])) {
k <- k + 1
if (k > nmodels) {
next
}
fit <- myarima(
x,
order = c(p, d, q),
seasonal = c(P, D, Q),
constant = !constant,
ic,
trace,
approximation,
method = method,
offset = offset,
xreg = xreg,
...
)
results[k, ] <- c(p, d, q, P, D, Q, !constant, fit$ic)
if (fit$ic < bestfit$ic) {
bestfit <- fit
constant <- !constant
}
}
}
}
if (k > nmodels) {
warning(sprintf(
"Stepwise search was stopped early due to reaching the model number limit: `nmodels = %i`",
nmodels
))
}
# Refit using ML if approximation used for IC
if (approximation && !is.null(bestfit$arma)) {
if (trace) {
cat("\n\n Now re-fitting the best model(s) without approximations...\n")
}
icorder <- order(results[, 8])
nmodels <- sum(!is.na(results[, 8]))
for (i in seq_len(nmodels)) {
k <- icorder[i]
fit <- myarima(
x,
order = c(results[k, 1], d, results[k, 3]),
seasonal = c(results[k, 4], D, results[k, 6]),
constant = results[k, 7] == 1,
ic,
trace,
approximation = FALSE,
method = method,
xreg = xreg,
...
)
if (fit$ic < Inf) {
bestfit <- fit
break
}
}
}
# Nothing fitted
if (bestfit$ic == Inf && !isTRUE(method == "CSS")) {
if (trace) {
cat("\n")
}
stop("No suitable ARIMA model found")
}
# Return best fit
bestfit$x <- orig.x
bestfit$series <- series
bestfit$ic <- NULL
bestfit$call <- match.call()
bestfit$call$x <- data.frame(x = x, check.names = FALSE)
bestfit$lambda <- lambda
bestfit$fitted <- fitted.Arima(bestfit)
if (trace) {
cat("\n\n Best model:", arima.string(bestfit, padding = TRUE), "\n\n")
}
bestfit
}
# Calls arima from stats package and adds data to the returned object
# Also allows refitting to new data
# and drift terms to be included.
myarima <- function(
x,
order = c(0, 0, 0),
seasonal = c(0, 0, 0),
constant = TRUE,
ic = "aic",
trace = FALSE,
approximation = FALSE,
offset = 0,
xreg = NULL,
method = NULL,
...
) {
# Length of non-missing interior
missing <- is.na(x)
firstnonmiss <- head(which(!missing), 1)
lastnonmiss <- tail(which(!missing), 1)
n <- sum(!missing[firstnonmiss:lastnonmiss])
m <- frequency(x)
use.season <- (sum(seasonal) > 0) && m > 0
diffs <- order[2] + seasonal[2]
if (is.null(method)) {
if (approximation) {
method <- "CSS"
} else {
method <- "CSS-ML"
}
}
if (diffs == 1 && constant) {
xreg <- `colnames<-`(
cbind(drift = seq_along(x), xreg),
make.unique(c(
"drift",
if (is.null(colnames(xreg)) && !is.null(xreg)) {
rep("", NCOL(xreg))
} else {
colnames(xreg)
}
))
)
if (use.season) {
suppressWarnings(
fit <- try(
stats::arima(
x = x,
order = order,
seasonal = list(order = seasonal, period = m),
xreg = xreg,
method = method,
...
),
silent = TRUE
)
)
} else {
suppressWarnings(
fit <- try(
stats::arima(x = x, order = order, xreg = xreg, method = method, ...),
silent = TRUE
)
)
}
} else {
if (use.season) {
suppressWarnings(
fit <- try(
stats::arima(
x = x,
order = order,
seasonal = list(order = seasonal, period = m),
include.mean = constant,
method = method,
xreg = xreg,
...
),
silent = TRUE
)
)
} else {
suppressWarnings(
fit <- try(
stats::arima(
x = x,
order = order,
include.mean = constant,
method = method,
xreg = xreg,
...
),
silent = TRUE
)
)
}
}
if (!inherits(fit, "try-error")) {
nstar <- n - order[2] - seasonal[2] * m
if (diffs == 1 && constant) {
fit$xreg <- xreg
}
npar <- length(fit$coef[fit$mask]) + 1
if (method == "CSS") {
fit$aic <- offset + nstar * log(fit$sigma2) + 2 * npar
}
if (!is.na(fit$aic)) {
fit$bic <- fit$aic + npar * (log(nstar) - 2)
fit$aicc <- fit$aic + 2 * npar * (npar + 1) / (nstar - npar - 1)
fit$ic <- switch(ic, bic = fit$bic, aic = fit$aic, aicc = fit$aicc)
} else {
fit$aic <- fit$bic <- fit$aicc <- fit$ic <- Inf
}
# Adjust residual variance to be unbiased
fit$sigma2 <- sum(fit$residuals^2, na.rm = TRUE) / (nstar - npar + 1)
# Check for unit roots
minroot <- 2
if (order[1] + seasonal[1] > 0) {
testvec <- fit$model$phi
k <- abs(testvec) > 1e-8
if (sum(k) > 0) {
last.nonzero <- max(which(k))
} else {
last.nonzero <- 0
}
if (last.nonzero > 0) {
testvec <- testvec[1:last.nonzero]
proots <- try(polyroot(c(1, -testvec)))
if (!inherits(proots, "try-error")) {
minroot <- min(minroot, abs(proots))
} else {
fit$ic <- Inf
}
}
}
if (order[3] + seasonal[3] > 0 && fit$ic < Inf) {
testvec <- fit$model$theta
k <- abs(testvec) > 1e-8
if (sum(k) > 0) {
last.nonzero <- max(which(k))
} else {
last.nonzero <- 0
}
if (last.nonzero > 0) {
testvec <- testvec[1:last.nonzero]
proots <- try(polyroot(c(1, testvec)))
if (!inherits(proots, "try-error")) {
minroot <- min(minroot, abs(proots))
} else {
fit$ic <- Inf
}
}
}
# Avoid bad models
if (minroot < 1 + 1e-2 || checkarima(fit)) {
fit$ic <- Inf
}
fit$xreg <- xreg
if (trace) {
cat("\n", arima.string(fit, padding = TRUE), ":", fit$ic)
}
return(structure(fit, class = c("fc_model", "forecast_ARIMA", "ARIMA", "Arima")))
} else {
# Catch errors due to unused arguments
if (length(grep("unused argument", fit, fixed = TRUE)) > 0L) {
stop(fit[1])
}
if (trace) {
cat("\n ARIMA(", order[1], ",", order[2], ",", order[3], ")", sep = "")
if (use.season) {
cat(
"(",
seasonal[1],
",",
seasonal[2],
",",
seasonal[3],
")[",
m,
"]",
sep = ""
)
}
if (constant && (order[2] + seasonal[2] == 0)) {
cat(" with non-zero mean")
} else if (constant && (order[2] + seasonal[2] == 1)) {
cat(" with drift ")
} else if (!constant && (order[2] + seasonal[2] == 0)) {
cat(" with zero mean ")
} else {
cat(" ")
}
cat(" :", Inf)
}
return(list(ic = Inf))
}
}
newmodel <- function(p, d, q, P, D, Q, constant, results) {
n <- nrow(results)
for (i in seq_len(n)) {
if (!all(is.na(results[i, seq(7)]))) {
if (all(c(p, d, q, P, D, Q, constant) == results[i, 1:7])) {
return(FALSE)
}
}
}
TRUE
}
arima.string <- function(object, padding = FALSE) {
order <- object$arma[c(1, 6, 2, 3, 7, 4, 5)]
m <- order[7]
result <- paste0("ARIMA(", order[1], ",", order[2], ",", order[3], ")")
if (m > 1 && sum(order[4:6]) > 0) {
result <- paste0(
result,
"(",
order[4],
",",
order[5],
",",
order[6],
")[",
m,
"]"
)
}
if (padding && m > 1 && sum(order[4:6]) == 0) {
result <- paste0(result, " ")
if (m <= 9) {
result <- paste0(result, " ")
} else if (m <= 99) {
result <- paste0(result, " ")
} else {
result <- paste0(result, " ")
}
}
if (!is.null(object$xreg)) {
if (NCOL(object$xreg) == 1 && "drift" %in% names(object$coef)) {
result <- paste(result, "with drift ")
} else {
result <- paste("Regression with", result, "errors")
}
} else {
if (
"constant" %in% names(object$coef) || "intercept" %in% names(object$coef)
) {
result <- paste(result, "with non-zero mean")
} else if (order[2] == 0 && order[5] == 0) {
result <- paste(result, "with zero mean ")
} else {
result <- paste(result, " ")
}
}
if (!padding) {
# Strip trailing spaces
result <- gsub("[ ]*$", "", result)
}
result
}
#' @export
summary.Arima <- function(object, ...) {
class(object) <- c("summary.Arima", class(object))
object
}
#' @export
print.summary.Arima <- function(x, ...) {
NextMethod()
cat("\nTraining set error measures:\n")
print(accuracy(x))
}
# Check that Arima object has positive coefficient variances without returning warnings
checkarima <- function(object) {
suppressWarnings(any(is.nan(sqrt(diag(object$var.coef)))))
}
#' Is an object constant?
#'
#' Returns true if the object's numerical values do not vary.
#'
#'
#' @param x Object to be tested.
#' @export
is.constant <- function(x) {
x <- as.numeric(x)
y <- rep(x[1], length(x))
isTRUE(all.equal(x, y))
}
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